RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 IMPDH1P20839 514 aa9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 CPN2P22792 545 aa9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 RPL6Q02878 288 aaKnown RBP9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 ZNF155Q12901 538 aaPredicted RBP9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 ELOCQ15369 112 aa9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 VPS26BQ4G0F5 336 aa9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 DEPDC1Q5TB30 811 aa9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 IZUMO2Q6UXV1 221 aa9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 NET1Q7Z628 596 aaPredicted RBP9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 CILP2Q8IUL8 1156 aa9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 GLIS1Q8NBF1 620 aa9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 WDR92Q96MX6 357 aa9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 GPR22Q99680 433 aa9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 CSNK1G1Q9HCP0 422 aa9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 DDX28Q9NUL7 540 aaKnown RBP9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 MAGEL2Q9UJ55 1249 aa9.27□□□□□ -0.92
CLTCL1-208ENST00000615606 SUV39H1O43463 412 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 AHSGP02765 367 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 MLLT3P42568 568 aaPredicted RBP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 MRPS22P82650 360 aaKnown RBP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 TMEM115Q12893 351 aaPredicted RBP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 KLF1Q13351 362 aaPredicted RBP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 MOGSQ13724 837 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 DCUN1D3Q8IWE4 304 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 TMEM130Q8N3G9 435 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 TXNDC5Q8NBS9 432 aaKnown RBP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 CENPIQ92674 756 aaPredicted RBP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 OR2M4Q96R27 311 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 EPB41L4BQ9H329 900 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 RIBC2Q9H4K1 309 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 TBC1D23Q9NUY8 699 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 SLCO3A1Q9UIG8 710 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 SCML1Q9UN30 329 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 SNX7Q9UNH6 387 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 TMEM98Q9Y2Y6 226 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 HCFC2Q9Y5Z7 792 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 MAGEA13PA6NCF6 341 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 TMEM150CB9EJG8 249 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 ZNF217O75362 1048 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 ECI2O75521 394 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 ZNF8P17098 575 aaPredicted RBP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 ADSLP30566 484 aaPredicted RBP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 PRR5P85299 388 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 PON2Q15165 354 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 PLEKHS1Q5SXH7 462 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 MBOAT1Q6ZNC8 495 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 CPXM2Q8N436 756 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 CAMKVQ8NCB2 501 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 OR2T12Q8NG77 320 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 KCNJ9Q92806 393 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 TMEM79Q9BSE2 394 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 WBP1LQ9NX94 342 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 ABI3Q9P2A4 366 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 KLHL33A6NCF5 533 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 C2orf71A6NGG8 1288 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 CLOCKO15516 846 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 PRMT3O60678 531 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 SEC24AO95486 1093 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 PAK4O96013 591 aaPredicted RBP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 CD70P32970 193 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 AFF1P51825 1210 aaKnown RBP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 FAM189BP81408 668 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 SLBPQ14493 270 aaKnown RBP eCLIP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 SEMA3AQ14563 771 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 CST6Q15828 149 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 ABHD13Q7L211 337 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 GLB1L3Q8NCI6 653 aaPredicted RBP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 PHF10Q8WUB8 498 aaKnown RBP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 DCAKDQ8WVC6 231 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 GLYATL1Q969I3 302 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 SIGLEC10Q96LC7 697 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 FNDC11Q9BVV2 318 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 KLF16Q9BXK1 252 aaPredicted RBP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 TDRD1Q9BXT4 1180 aaKnown RBP9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 DERL2Q9GZP9 239 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 HCFC1R1Q9NWW0 138 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 PDP2Q9P2J9 529 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 UBR3Q6ZT12 1888 aa9.27□□□□□ -0.93
CLTCL1-208ENST00000615606 A0A1W2PQU0 124 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 PIP5K1BO14986 540 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 DUSP3P51452 185 aaPredicted RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC7A2P52569 658 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 PLA2G16P53816 162 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC7A9P82251 487 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 NFATC2Q13469 925 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 NAPRTQ6XQN6 538 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 EIF3MQ7L2H7 374 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 YTHDF3Q7Z739 585 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 ZNF598Q86UK7 904 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 APCDD1Q8J025 514 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 DHRSXQ8N5I4 330 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 SCAIQ8N9R8 606 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 C2CD4AQ8NCU7 369 aaPredicted RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 ESAMQ96AP7 390 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 RANBP9Q96S59 729 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 DPYSL5Q9BPU6 564 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 EPS8L2Q9H6S3 715 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 POPDC3Q9HBV1 291 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 SUCOQ9UBS9 1254 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 COPS7AQ9UBW8 275 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms