RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 RBM22Q9NW64 420 aaKnown RBP eCLIP9.94□□□□□ -0.82
SSX3-204ENST00000612497 PLA2G3Q9NZ20 509 aa9.94□□□□□ -0.82
SSX3-204ENST00000612497 ABI3Q9P2A4 366 aa9.94□□□□□ -0.82
SSX3-204ENST00000612497 DHCR7Q9UBM7 475 aaKnown RBP9.94□□□□□ -0.82
SSX3-204ENST00000612497 MATN2O00339 956 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 SOCS6O14544 535 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 RASAL1O95294 804 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 PIRTP0C851 137 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 SERPINB6P35237 376 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 ZNF165P49910 485 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 TNFSF10P50591 281 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 NIPAL4Q0D2K0 466 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 FOXD4Q12950 439 aaPredicted RBP9.93□□□□□ -0.82
SSX3-204ENST00000612497 TUBB8Q3ZCM7 444 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 HSP90AA4PQ58FG1 418 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 ALG1LQ6GMV1 187 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 KIRREL2Q6UWL6 708 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 DNAJB8Q8NHS0 232 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 ARRDC2Q8TBH0 407 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 FOXC2Q99958 501 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 TMEM121Q9BTD3 319 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 GPR63Q9BZJ6 419 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.93□□□□□ -0.82
SSX3-204ENST00000612497 SRMSQ9H3Y6 488 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 CLSTN2Q9H4D0 955 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 DEF6Q9H4E7 631 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 HAUS2Q9NVX0 235 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 IRAK4Q9NWZ3 460 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 TNFRSF10DQ9UBN6 386 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 TMPRSS11EQ9UL52 423 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 COLEC10Q9Y6Z7 277 aa9.93□□□□□ -0.82
SSX3-204ENST00000612497 FOSL1P15407 271 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 POLR2FP61218 127 aaKnown RBP9.92□□□□□ -0.82
SSX3-204ENST00000612497 GSE1Q14687 1217 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 LONRF1Q17RB8 773 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 SKOR2Q2VWA4 1001 aaPredicted RBP9.92□□□□□ -0.82
SSX3-204ENST00000612497 DEFB110Q30KQ9 67 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 ATP13A5Q4VNC0 1218 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 METRNLQ641Q3 311 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 TMEM220Q6QAJ8 160 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 Q71RC1 249 aaPredicted RBP9.92□□□□□ -0.82
SSX3-204ENST00000612497 TMC3Q7Z5M5 1100 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 POLNQ7Z5Q5 900 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 ZNF655Q8N720 491 aaPredicted RBP9.92□□□□□ -0.82
SSX3-204ENST00000612497 BEND7Q8N7W2 519 aaPredicted RBP9.92□□□□□ -0.82
SSX3-204ENST00000612497 RASGEF1AQ8N9B8 481 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 ACBD4Q8NC06 268 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 BRSK1Q8TDC3 778 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 CA5BP1Q8WTZ4 195 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 LCN9Q8WX39 176 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 VPS50Q96JG6 964 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 MAGED4Q96JG8 741 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 CSPG4P5Q96PW8 444 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 VPS35Q96QK1 796 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 PITPNM3Q9BZ71 974 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 GANQ9H2C0 597 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 CXXC4Q9H2H0 198 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 NLRC4Q9NPP4 1024 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 NFKBIL1Q9UBC1 381 aaPredicted RBP9.92□□□□□ -0.82
SSX3-204ENST00000612497 MEMO1Q9Y316 297 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 HS3ST3B1Q9Y662 390 aa9.92□□□□□ -0.82
SSX3-204ENST00000612497 HCFC1P51610 2035 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 C17orf113A0A1B0GUU1 675 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 OR2AG2A6NM03 316 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 BTN3A3O00478 584 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 ZSCAN9O15535 394 aaPredicted RBP9.91□□□□□ -0.82
SSX3-204ENST00000612497 F10P00742 488 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 HLA-DQB2P05538 268 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 SLC35G4P0C7Q5 338 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 ALAS2P22557 587 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 NDUFS1P28331 727 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 CD86P42081 329 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 CTSCP53634 463 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 JAM2P57087 298 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 MAMLD1Q13495 774 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 DPYSL2Q16555 572 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 RBBP7Q16576 425 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 TIGD7Q6NT04 549 aaPredicted RBP9.91□□□□□ -0.82
SSX3-204ENST00000612497 SHISA6Q6ZSJ9 500 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 NCCRP1Q6ZVX7 275 aaPredicted RBP9.91□□□□□ -0.82
SSX3-204ENST00000612497 HOOK3Q86VS8 718 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 LRRC49Q8IUZ0 686 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 MCOLN2Q8IZK6 566 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 CCDC110Q8TBZ0 833 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 HSPH1Q92598 858 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 TREX2Q9BQ50 279 aaPredicted RBP9.91□□□□□ -0.82
SSX3-204ENST00000612497 ZCCHC2Q9C0B9 1178 aaKnown RBP9.91□□□□□ -0.82
SSX3-204ENST00000612497 MRM3Q9HC36 420 aaKnown RBP9.91□□□□□ -0.82
SSX3-204ENST00000612497 FAM60AQ9NP50 221 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 BPIFA1Q9NP55 256 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 DLL4Q9NR61 685 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 CCM2LQ9NUG4 571 aaPredicted RBP9.91□□□□□ -0.82
SSX3-204ENST00000612497 PARVAQ9NVD7 372 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 PTGFRNQ9P2B2 879 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 FAM8A1Q9UBU6 413 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 RPH3AQ9Y2J0 694 aaPredicted RBP9.91□□□□□ -0.82
SSX3-204ENST00000612497 ZNF711Q9Y462 761 aa9.91□□□□□ -0.82
SSX3-204ENST00000612497 DNMT3AQ9Y6K1 912 aaPredicted RBP9.91□□□□□ -0.82
SSX3-204ENST00000612497 H3BMH7 237 aa9.9□□□□□ -0.82
SSX3-204ENST00000612497 BTN3A1O00481 513 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms