RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	EN1	Q05925	392 aa	Predicted RBP	13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	PON2	Q15165	354 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	SMU1	Q2TAY7	513 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	TIGD5	Q53EQ6	642 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	SHQ1	Q6PI26	577 aa	Known RBP	13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	PLD3	Q8IV08	490 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	LYSMD2	Q8IV50	215 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	OR52B6	Q8NGF0	335 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	METTL6	Q8TCB7	284 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	ALOXE3	Q9BYJ1	711 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	TPK1	Q9H3S4	243 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	TMLHE	Q9NVH6	421 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	NUDT4	Q9NZJ9	180 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	KL	Q9UEF7	1012 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	POU2F3	Q9UKI9	436 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	TESMIN	Q9Y4I5	508 aa		13.51	□□□□□ -0.25
UBE2F-223	ENST00000612130	MOXD2P	A6NHM9	499 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	RGS10	O43665	173 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	CAPN1	P07384	714 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	FCGRT	P55899	365 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	GALNT3	Q14435	633 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	AP5B1	Q2VPB7	878 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	VARS2	Q5ST30	1063 aa	Known RBP	13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	CATSPERE	Q5SY80	951 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	CHPF	Q8IZ52	775 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	PSMA8	Q8TAA3	256 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	CHAC2	Q8WUX2	184 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	SLC39A13	Q96H72	371 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	YME1L1	Q96TA2	773 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	EHD1	Q9H4M9	534 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	POLE4	Q9NR33	117 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	EVL	Q9UI08	416 aa	Predicted RBP	13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	TRMT6	Q9UJA5	497 aa	Known RBP	13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	TMEM98	Q9Y2Y6	226 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	ASB1	Q9Y576	335 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	PCDHB14	Q9Y5E9	798 aa		13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	MN1	Q10571	1320 aa	Predicted RBP	13.5	□□□□□ -0.25
UBE2F-223	ENST00000612130	IGLV3-10	A0A075B6K4	115 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130		H0Y626	953 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	CREG1	O75629	220 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	TRIM16	O95361	564 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	PTTG1	O95997	202 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	FTH1	P02794	183 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	MT-ND2	P03891	347 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	PRSS56	P0CW18	603 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	PRKACG	P22612	351 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	FMO3	P31513	532 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	MAGEA2	P43356	314 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	TUBA1B	P68363	451 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	MAD2L1	Q13257	205 aa	Predicted RBP	13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	MAPKAPK3	Q16644	382 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	PLEKHG6	Q3KR16	790 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	PARP15	Q460N3	678 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	RUNDC3A	Q59EK9	446 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	ATG9B	Q674R7	924 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	DLK2	Q6UY11	383 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	TUBA1A	Q71U36	451 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	PAGE2	Q7Z2X7	111 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	DPP9	Q86TI2	863 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	MSRB3	Q8IXL7	192 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	SLC7A5P1	Q8MH63	180 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	GPRC5A	Q8NFJ5	357 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	DNAJB8	Q8NHS0	232 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	MCFD2	Q8NI22	146 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	SLC16A10	Q8TF71	515 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	NCLN	Q969V3	563 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	LGALS12	Q96DT0	336 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	GAD1	Q99259	594 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	APOL4	Q9BPW4	351 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	HOXD1	Q9GZZ0	328 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	MMP27	Q9H306	513 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	ACOT13	Q9NPJ3	140 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	VPS51	Q9UID3	782 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	RBMX2	Q9Y388	322 aa	Known RBP	13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	TNPO3	Q9Y5L0	923 aa	Known RBP	13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	A3GALT2	U3KPV4	340 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	MEIS3P2	A8K0S8	358 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	TNFRSF10B	O14763	440 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	RGS13	O14921	159 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	ASNA1	O43681	348 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	RFPL2	O75678	378 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	IL6	P05231	212 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	PKM	P14618	531 aa	Known RBP	13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	PFKL	P17858	780 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	UGT2B10	P36537	528 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	PGF	P49763	221 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	SCNN1G	P51170	649 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	IL2	P60568	153 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	VAC14	Q08AM6	782 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	ZNF235	Q14590	738 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	MFSD10	Q14728	455 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.49	□□□□□ -0.25	1e-10	■■■■■ 77.9
UBE2F-223	ENST00000612130	TRIP4	Q15650	581 aa	Predicted RBP	13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	PTPRN	Q16849	979 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	ALF	Q53S48	1182 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	MS4A13	Q5J8X5	152 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	CCDC81	Q6ZN84	652 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	DCBLD1	Q8N8Z6	715 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	PPP1R13L	Q8WUF5	828 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms