RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 CD86P42081 329 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 SERPINB4P48594 390 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 RAD51Q06609 339 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 POU4F3Q15319 338 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 CPSF6Q16630 551 aaKnown RBP eCLIP11.97□□□□□ -0.49
HLA-F-230ENST00000606273 UGP2Q16851 508 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 MSMPQ1L6U9 139 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 DARS2Q6PI48 645 aaKnown RBP11.97□□□□□ -0.49
HLA-F-230ENST00000606273 PRUNE1Q86TP1 453 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 BBS5Q8N3I7 341 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 RASGEF1CQ8N431 466 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 HCAR2Q8TDS4 363 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 TADA1Q96BN2 335 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 IMP4Q96G21 291 aaKnown RBP11.97□□□□□ -0.49
HLA-F-230ENST00000606273 ZNF641Q96N77 438 aaPredicted RBP11.97□□□□□ -0.49
HLA-F-230ENST00000606273 OSBPL9Q96SU4 736 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 TMEM121Q9BTD3 319 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 YIPF2Q9BWQ6 316 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 TDRD1Q9BXT4 1180 aaKnown RBP11.97□□□□□ -0.49
HLA-F-230ENST00000606273 GSDMCQ9BYG8 508 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 ATP13A3Q9H7F0 1226 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 CARS2Q9HA77 564 aaKnown RBP11.97□□□□□ -0.49
HLA-F-230ENST00000606273 GLOD4Q9HC38 313 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 TRNAU1APQ9NX07 287 aaKnown RBP11.97□□□□□ -0.49
HLA-F-230ENST00000606273 UBP1Q9NZI7 540 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 AMACRQ9UHK6 382 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 SNX12Q9UMY4 172 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 PCDHGA6Q9Y5G7 932 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 CELSR1Q9NYQ6 3014 aa11.97□□□□□ -0.49
HLA-F-230ENST00000606273 A0A1B0GTL3 188 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 PRSS38A1L453 326 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 GOLGA6L9A6NEM1 432 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 A8MX80 341 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 PGLSO95336 258 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 MT-CYBP00156 380 aaPredicted RBP11.96□□□□□ -0.49
HLA-F-230ENST00000606273 XPAP23025 273 aaPredicted RBP11.96□□□□□ -0.49
HLA-F-230ENST00000606273 NFKBIAP25963 317 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 CCL11P51671 97 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 ILF3Q12906 894 aaKnown RBP eCLIP11.96□□□□□ -0.49
HLA-F-230ENST00000606273 RALGDSQ12967 914 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 SNX1Q13596 522 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 OASLQ15646 514 aaKnown RBP11.96□□□□□ -0.49
HLA-F-230ENST00000606273 LONRF2Q1L5Z9 754 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 RALGPS1Q5JS13 557 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 SLC30A9Q6PML9 568 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 WDR74Q6RFH5 385 aaPredicted RBP11.96□□□□□ -0.49
HLA-F-230ENST00000606273 PID1Q7Z2X4 250 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 CDKL3Q8IVW4 592 aaPredicted RBP11.96□□□□□ -0.49
HLA-F-230ENST00000606273 PRELID2Q8N945 189 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 FAM71DQ8N9W8 422 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 GLIS1Q8NBF1 620 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 CCDC110Q8TBZ0 833 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 PIH1D2Q8WWB5 315 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 SNRNP40Q96DI7 357 aaKnown RBP11.96□□□□□ -0.49
HLA-F-230ENST00000606273 RNF31Q96EP0 1072 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 AHCYL2Q96HN2 611 aaKnown RBP11.96□□□□□ -0.49
HLA-F-230ENST00000606273 OXNAD1Q96HP4 312 aaPredicted RBP11.96□□□□□ -0.49
HLA-F-230ENST00000606273 RANBP9Q96S59 729 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 ULBP3Q9BZM4 244 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 PCDH12Q9NPG4 1184 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 KLHL8Q9P2G9 620 aaPredicted RBP11.96□□□□□ -0.49
HLA-F-230ENST00000606273 ITGB1BP2Q9UKP3 347 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 CHKBQ9Y259 395 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 ACTL7BQ9Y614 415 aa11.96□□□□□ -0.49
HLA-F-230ENST00000606273 SHANK1Q9Y566 2161 aa11.96□□□□□ -0.5
HLA-F-230ENST00000606273 AKAP9Q99996 3911 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.95□□□□□ -0.5
HLA-F-230ENST00000606273 CFAP69A5D8W1 941 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 A6NCN8 305 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 SOCS5O75159 536 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 RECQL5O94762 991 aaPredicted RBP11.95□□□□□ -0.5
HLA-F-230ENST00000606273 CEACAM5P06731 702 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 ETS1P14921 441 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 CTPS1P17812 591 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 KCNJ1P48048 391 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 OLIG2Q13516 323 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 GRM3Q14832 879 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 ANKRD20A2Q5SQ80 823 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 ANKRD20A1Q5TYW2 823 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 ANKRD20A3Q5VUR7 823 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 BRAT1Q6PJG6 821 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 KDELC1Q6UW63 502 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 ZAR1Q86SH2 424 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 ZNF761Q86XN6 746 aaPredicted RBP11.95□□□□□ -0.5
HLA-F-230ENST00000606273 TAB3Q8N5C8 712 aaPredicted RBP11.95□□□□□ -0.5
HLA-F-230ENST00000606273 OR10G6Q8NH81 332 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 PNPLA2Q96AD5 504 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 PBKQ96KB5 322 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 TRIB3Q96RU7 358 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 MLPHQ9BV36 600 aaPredicted RBP11.95□□□□□ -0.5
HLA-F-230ENST00000606273 AP1M1Q9BXS5 423 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 SLC25A51Q9H1U9 297 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 ASF1BQ9NVP2 202 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 ADGRE2Q9UHX3 823 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 HIVEP1P15822 2718 aa11.95□□□□□ -0.5
HLA-F-230ENST00000606273 RP1L1Q8IWN7 2480 aaPredicted RBP11.94□□□□□ -0.5
HLA-F-230ENST00000606273 ANKUB1A6NFN9 424 aa11.94□□□□□ -0.5
HLA-F-230ENST00000606273 NPIPB15A6NHN6 443 aaPredicted RBP11.94□□□□□ -0.5
HLA-F-230ENST00000606273 DPM1O60762 260 aa11.94□□□□□ -0.5
HLA-F-230ENST00000606273 PMPCBO75439 489 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms