RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 RORAP35398 523 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 VAV2P52735 878 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 SPA17Q15506 151 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 CERS6Q6ZMG9 384 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 CDKL3Q8IVW4 592 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 GLIS1Q8NBF1 620 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 SLC38A9Q8NBW4 561 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 SPDYE1Q8NFV5 336 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 FERD3LQ96RJ6 166 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 PITPNM3Q9BZ71 974 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 SLC29A3Q9BZD2 475 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 SLC7A5P2Q9GIP4 190 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 CHRNA10Q9GZZ6 450 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 ACTR5Q9H9F9 607 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 ZDHHC3Q9NYG2 299 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 PLEKHB1Q9UF11 243 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 FKBPLQ9UIM3 349 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 AP1M2Q9Y6Q5 423 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 MYO9AB2RTY4 2548 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 CCDC66A2RUB6 948 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 C2orf74A8MZ97 194 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 C9J4A7 227 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 QSOX1O00391 747 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 GPR39O43194 453 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 SGTAO43765 313 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 AGFG2O95081 481 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 CTNNA2P26232 953 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 CA5AP35218 305 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 RPS18P62269 152 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 PLOD1Q02809 727 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 IL10RAQ13651 578 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 ANKRD20A2Q5SQ80 823 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 ANKRD20A1Q5TYW2 823 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 ANKRD20A3Q5VUR7 823 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 HOOK3Q86VS8 718 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 RAB43Q86YS6 212 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 GPR135Q8IZ08 494 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 ENDOVQ8N8Q3 282 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 RMDN2Q96LZ7 410 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 SLAMF7Q9NQ25 335 aa17.3■□□□□ 0.36
SHKBP1-227ENST00000602011 IGLV3-16A0A075B6K0 115 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 GSAPA4D1B5 854 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 E7EQ34 232 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 H7C0S8 307 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 KDM1AO60341 852 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 SORBS2O94875 1100 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 AP2A2O94973 939 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 DDAH2O95865 285 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 PTPN7P35236 360 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 ITGA1P56199 1179 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 CHAF1BQ13112 559 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 MSLNQ13421 630 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 PTPRCAPQ14761 206 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 LLGL1Q15334 1064 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 CPZQ66K79 652 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 DAAM2Q86T65 1068 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 AMIGO1Q86WK6 493 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 SYTL1Q8IYJ3 562 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 HEMGNQ9BXL5 484 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 OR52A5Q9H2C5 316 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 COG4Q9H9E3 785 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 PCMTD2Q9NV79 361 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 PCDHA3Q9Y5H8 950 aa17.29■□□□□ 0.36
SHKBP1-227ENST00000602011 TMEM150CB9EJG8 249 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 F8W8V4 182 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 TJP3O95049 919 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 RBP3P10745 1247 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 PTGIRP43119 386 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 TBX2Q13207 712 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 SSPNQ14714 243 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 NADK2Q4G0N4 442 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 DUS1LQ6P1R4 473 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 ACTL9Q8TC94 416 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 SSC4DQ8WTU2 575 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 TFGQ92734 400 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 N4BP2L2Q92802 583 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 PNPLA2Q96AD5 504 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 NACC2Q96BF6 587 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 TCTN2Q96GX1 697 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 SGSM3Q96HU1 749 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 FER1L6-AS2Q96M78 137 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 SPATA13Q96N96 652 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 TRAPPC9Q96Q05 1148 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 SMAD5Q99717 465 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 TLR10Q9BXR5 811 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 OSBPL8Q9BZF1 889 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 GPR83Q9NYM4 423 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 POLG2Q9UHN1 485 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 PCDHA13Q9Y5I0 950 aa17.28■□□□□ 0.36
SHKBP1-227ENST00000602011 TRBV5-4A0A0C4DH59 114 aa17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 A1L4Q6 167 aa17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 F5H423 210 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 LIN7AO14910 233 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 PSMD3O43242 534 aa17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 SEMA7AO75326 666 aa17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 CAPN1P07384 714 aa17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 CTNNA1P35221 906 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 CYLC1P35663 651 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 ZNF140P52738 457 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms