RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ANKRD12Q6UB98 2062 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 ERICH4A6NGS2 130 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 KCNJ13O60928 360 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 PSIP1O75475 530 aaKnown RBP17.6■□□□□ 0.41
VRK3-225ENST00000601912 IGHV4-34P06331 123 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 RPS17P08708 135 aaKnown RBP17.6■□□□□ 0.41
VRK3-225ENST00000601912 MPSTP25325 297 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 PDHA2P29803 388 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 MAGEA9P43362 315 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 AGTR2P50052 363 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 YPEL5P62699 121 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 NFE2L1Q14494 772 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 NFATC4Q14934 902 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 PCBP2Q15366 365 aaKnown RBP eCLIP17.6■□□□□ 0.41
VRK3-225ENST00000601912 AFAP1L2Q8N4X5 818 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 BIRC7Q96CA5 298 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 BMFQ96LC9 184 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 SHCBP1LQ9BZQ2 653 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 WWOXQ9NZC7 414 aa17.6■□□□□ 0.41
VRK3-225ENST00000601912 PCYT1BQ9Y5K3 369 aaPredicted RBP17.6■□□□□ 0.41
VRK3-225ENST00000601912 LRRC14BA6NHZ5 514 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 MLYCDO95822 493 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 PXNP49023 591 aaPredicted RBP17.59■□□□□ 0.41
VRK3-225ENST00000601912 HNMTP50135 292 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 THOP1P52888 689 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 AQP5P55064 265 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 CDH13P55290 713 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 PFN3P60673 137 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 CLCQ05315 142 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 METTL2BQ6P1Q9 378 aaKnown RBP17.59■□□□□ 0.41
VRK3-225ENST00000601912 RPS27LQ71UM5 84 aaKnown RBP17.59■□□□□ 0.41
VRK3-225ENST00000601912 CHST15Q7LFX5 561 aaPredicted RBP17.59■□□□□ 0.41
VRK3-225ENST00000601912 CUZD1Q86UP6 607 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 TMEM145Q8NBT3 493 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 OR56A4Q8NGH8 313 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 AGR3Q8TD06 166 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 RHBDF1Q96CC6 855 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 TIMM29Q9BSF4 260 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 TMEM120AQ9BXJ8 343 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 KCNK13Q9HB14 408 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 VTI1BQ9UEU0 232 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 SLC23A2Q9UGH3 650 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 ZDHHC2Q9UIJ5 367 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 CA5BQ9Y2D0 317 aa17.59■□□□□ 0.41
VRK3-225ENST00000601912 RABIFP47224 123 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 SIGLEC14Q08ET2 396 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 LCP2Q13094 533 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 PYCR3Q53H96 274 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 FBXO48Q5FWF7 155 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 SH2D4BQ5SQS7 431 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 METRNLQ641Q3 311 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 TTC23LQ6PF05 361 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 ENPP7Q6UWV6 458 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 GCNT7Q6ZNI0 430 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 RASGRP3Q8IV61 690 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 FAM160A2Q8N612 972 aaPredicted RBP17.58■□□□□ 0.41
VRK3-225ENST00000601912 TRPC4APQ8TEL6 797 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 ZNF483Q8TF39 744 aaPredicted RBP17.58■□□□□ 0.41
VRK3-225ENST00000601912 SCARF2Q96GP6 870 aaPredicted RBP17.58■□□□□ 0.41
VRK3-225ENST00000601912 FAR2Q96K12 515 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 WDR92Q96MX6 357 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 HGH1Q9BTY7 390 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 WWP1Q9H0M0 922 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 PCED1AQ9H1Q7 454 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 STN1Q9H668 368 aaKnown RBP17.58■□□□□ 0.41
VRK3-225ENST00000601912 EBF2Q9HAK2 575 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 EIF2B4Q9UI10 523 aaKnown RBP17.58■□□□□ 0.41
VRK3-225ENST00000601912 PCTPQ9UKL6 214 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 ACSL5Q9ULC5 683 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 SUFUQ9UMX1 484 aa17.58■□□□□ 0.41
VRK3-225ENST00000601912 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.58■□□□□ 0.41
VRK3-225ENST00000601912 PRSS38A1L453 326 aa17.58■□□□□ 0.4
VRK3-225ENST00000601912 H0Y8X5 98 aa17.58■□□□□ 0.4
VRK3-225ENST00000601912 E2F3O00716 465 aa17.58■□□□□ 0.4
VRK3-225ENST00000601912 GIPC1O14908 333 aa17.58■□□□□ 0.4
VRK3-225ENST00000601912 ACP5P13686 325 aa17.58■□□□□ 0.4
VRK3-225ENST00000601912 DMPKQ09013 629 aa17.58■□□□□ 0.4
VRK3-225ENST00000601912 FAM83HQ6ZRV2 1179 aaPredicted RBP17.58■□□□□ 0.4
VRK3-225ENST00000601912 FRMD1Q8N878 549 aa17.58■□□□□ 0.4
VRK3-225ENST00000601912 UBTD2Q8WUN7 234 aa17.58■□□□□ 0.4
VRK3-225ENST00000601912 SNX19Q92543 992 aa17.58■□□□□ 0.4
VRK3-225ENST00000601912 ESAMQ96AP7 390 aa17.58■□□□□ 0.4
VRK3-225ENST00000601912 SPACA7Q96KW9 195 aa17.58■□□□□ 0.4
VRK3-225ENST00000601912 NSUN5Q96P11 429 aaKnown RBP17.58■□□□□ 0.4
VRK3-225ENST00000601912 CD244Q9BZW8 370 aa17.58■□□□□ 0.4
VRK3-225ENST00000601912 SEMA4BQ9NPR2 832 aaPredicted RBP17.58■□□□□ 0.4
VRK3-225ENST00000601912 TM7SF3Q9NS93 570 aa17.58■□□□□ 0.4
VRK3-225ENST00000601912 GPSM3Q9Y4H4 160 aa17.58■□□□□ 0.4
VRK3-225ENST00000601912 A0A1W2PPC4 97 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 ARHGEF33A8MVX0 844 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 MATN2O00339 956 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 TNFRSF10CO14798 259 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 HDAC3O15379 428 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 TAPBPO15533 448 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 DCTN3O75935 186 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 FUCA1P04066 466 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 ALOX15P16050 662 aaPredicted RBP17.57■□□□□ 0.4
VRK3-225ENST00000601912 TSPAN8P19075 237 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 GNPDA1P46926 289 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 HSPA7P48741 367 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms