RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 KCNK13Q9HB14 408 aa11.33□□□□□ -0.6
ZNF548-211ENST00000600927 EML4Q9HC35 981 aaKnown RBP11.33□□□□□ -0.6
ZNF548-211ENST00000600927 FZD3Q9NPG1 666 aa11.33□□□□□ -0.6
ZNF548-211ENST00000600927 CPSF2Q9P2I0 782 aaKnown RBP11.33□□□□□ -0.6
ZNF548-211ENST00000600927 VTI1BQ9UEU0 232 aa11.33□□□□□ -0.6
ZNF548-211ENST00000600927 PCOLCE2Q9UKZ9 415 aa11.33□□□□□ -0.6
ZNF548-211ENST00000600927 WASF3Q9UPY6 502 aa11.33□□□□□ -0.6
ZNF548-211ENST00000600927 APOBEC2Q9Y235 224 aaKnown RBP11.33□□□□□ -0.6
ZNF548-211ENST00000600927 CA5BQ9Y2D0 317 aa11.33□□□□□ -0.6
ZNF548-211ENST00000600927 HS3ST3A1Q9Y663 406 aa11.33□□□□□ -0.6
ZNF548-211ENST00000600927 ZNF106Q9H2Y7 1883 aaKnown RBP11.33□□□□□ -0.6
ZNF548-211ENST00000600927 COL5A1P20908 1838 aaPredicted RBP11.32□□□□□ -0.6
ZNF548-211ENST00000600927 STX16-NPEPL1H3BU86 382 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 TK2O00142 265 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 STX16O14662 325 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 RAD51BO15315 384 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 SLC31A1O15431 190 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 YKT6O15498 198 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 FLRT2O43155 660 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 SH3BP5O60239 455 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 OR1I1O60431 355 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 SLC4A1P02730 911 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 F7P08709 466 aaPredicted RBP11.32□□□□□ -0.6
ZNF548-211ENST00000600927 ELFN1P0C7U0 828 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 PRSS56P0CW18 603 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 UGT1A6P19224 532 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 UGT1A1P22309 533 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 UGT1A4P22310 534 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 EPHA8P29322 1005 aaPredicted RBP11.32□□□□□ -0.6
ZNF548-211ENST00000600927 AKT2P31751 481 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 UGT1A3P35503 534 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 UGT1A5P35504 534 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 MAPK9P45984 424 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 ATP13A5Q4VNC0 1218 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 LRRC73Q5JTD7 316 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 GPRC6AQ5T6X5 926 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 METTL21CQ5VZV1 264 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 RAB44Q7Z6P3 723 aaPredicted RBP11.32□□□□□ -0.6
ZNF548-211ENST00000600927 ADAMTSL2Q86TH1 951 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 SLC22A18ASQ8N1D0 253 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 SAP25Q8TEE9 199 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 BTN2A2Q8WVV5 523 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 KLK6Q92876 244 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 BMFQ96LC9 184 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 CAMK1GQ96NX5 476 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 LRRC37BQ96QE4 947 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 ATOH8Q96SQ7 321 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 SORT1Q99523 831 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 SLC32A1Q9H598 525 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 ACTR5Q9H9F9 607 aaPredicted RBP11.32□□□□□ -0.6
ZNF548-211ENST00000600927 MRGBPQ9NV56 204 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 DNAJC28Q9NX36 388 aa11.32□□□□□ -0.6
ZNF548-211ENST00000600927 DOCK9Q9BZ29 2069 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 WDFY3Q8IZQ1 3526 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 POM121BA6NF01 834 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 IGLON5A6NGN9 336 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 A8MT66 165 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 ZBTB14O43829 449 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 HNRNPCL1O60812 293 aaKnown RBP11.31□□□□□ -0.6
ZNF548-211ENST00000600927 CCDC22O60826 627 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 DKK1O94907 266 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 HSPA4LO95757 839 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 TSPAN12O95859 305 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 ATP1B2P14415 290 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-211ENST00000600927 TEAD1P28347 426 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 GLRBP48167 497 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 RPL14P50914 215 aaKnown RBP11.31□□□□□ -0.6
ZNF548-211ENST00000600927 NAGLUP54802 743 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 PFN3P60673 137 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 GBX1Q14549 363 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 GALNTL6Q49A17 601 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 CFAP157Q5JU67 520 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 PLEKHS1Q5SXH7 462 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 CES4AQ5XG92 561 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 Q6ZVL8 140 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 NEK10Q6ZWH5 1172 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 HSD11B1LQ7Z5J1 315 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 AFAP1L2Q8N4X5 818 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 OXR1Q8N573 874 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 TP53I13Q8NBR0 393 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-211ENST00000600927 OR13H1Q8NG92 308 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 DTD2Q96FN9 168 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 DCUN1D1Q96GG9 259 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 ZNF514Q96K75 400 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-211ENST00000600927 SPATA16Q9BXB7 569 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 C20orf27Q9GZN8 174 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 ABCG8Q9H221 673 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 RDH14Q9HBH5 336 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 NPHS2Q9NP85 383 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 SAR1AQ9NR31 198 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 BTBD3Q9Y2F9 522 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 DNAJC16Q9Y2G8 782 aa11.31□□□□□ -0.6
ZNF548-211ENST00000600927 CEP295Q9C0D2 2601 aa11.3□□□□□ -0.6
ZNF548-211ENST00000600927 SLC16A5O15375 505 aa11.3□□□□□ -0.6
ZNF548-211ENST00000600927 ITM2AO43736 263 aa11.3□□□□□ -0.6
ZNF548-211ENST00000600927 NIPSNAP2O75323 286 aa11.3□□□□□ -0.6
ZNF548-211ENST00000600927 SLC25A14O95258 325 aaPredicted RBP11.3□□□□□ -0.6
ZNF548-211ENST00000600927 PAK4O96013 591 aaPredicted RBP11.3□□□□□ -0.6
ZNF548-211ENST00000600927 FTH1P02794 183 aa11.3□□□□□ -0.6
ZNF548-211ENST00000600927 FGF4P08620 206 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms