RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 RHOXF2BP0C7M4 288 aa19.18■□□□□ 0.66
SHKBP1-214ENST00000597396 SSTR1P30872 391 aa19.18■□□□□ 0.66
SHKBP1-214ENST00000597396 INHBCP55103 352 aa19.18■□□□□ 0.66
SHKBP1-214ENST00000597396 PLEKHS1Q5SXH7 462 aa19.18■□□□□ 0.66
SHKBP1-214ENST00000597396 CEP128Q6ZU80 1094 aa19.18■□□□□ 0.66
SHKBP1-214ENST00000597396 SLC22A15Q8IZD6 547 aa19.18■□□□□ 0.66
SHKBP1-214ENST00000597396 JPH3Q8WXH2 748 aaPredicted RBP19.18■□□□□ 0.66
SHKBP1-214ENST00000597396 NCSTNQ92542 709 aa19.18■□□□□ 0.66
SHKBP1-214ENST00000597396 RHOXF2Q9BQY4 288 aa19.18■□□□□ 0.66
SHKBP1-214ENST00000597396 MVB12BQ9H7P6 319 aa19.18■□□□□ 0.66
SHKBP1-214ENST00000597396 ASF1AQ9Y294 204 aa19.18■□□□□ 0.66
SHKBP1-214ENST00000597396 SPEGQ15772 3267 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 TMX2-CTNND1H3BSU7 103 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 GSTA2P09210 222 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 TYRP1P17643 537 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 CSF2RBP32927 897 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 PHF19Q5T6S3 580 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 ZNF549Q6P9A3 640 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 VRK3Q8IV63 474 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 ZBTB2Q8N680 514 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 PHC3Q8NDX5 983 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 SKA2Q8WVK7 121 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 ZFPM2Q8WW38 1151 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 GRAMD1AQ96CP6 724 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 AARSD1Q9BTE6 412 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 STRADBQ9C0K7 418 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 KIR3DX1Q9H7L2 352 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 MOCS1Q9NZB8 636 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 CDYLQ9Y232 598 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 ENTPD2Q9Y5L3 495 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 CHD6Q8TD26 2715 aa19.17■□□□□ 0.66
SHKBP1-214ENST00000597396 SLCO2B1O94956 709 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 AHSGP02765 367 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 ACADLP28330 430 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 PDX1P52945 283 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 SQSTM1Q13501 440 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 CUL1Q13616 776 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 TTLL9Q3SXZ7 439 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 KLHL35Q6PF15 583 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 C3orf62Q6ZUJ4 267 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 TMPRSS9Q7Z410 1059 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 B3GNT8Q7Z7M8 397 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 GALNT7Q86SF2 657 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 IFT20Q8IY31 132 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 LRRN4CLQ8ND94 238 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 ACVR1CQ8NER5 493 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 CFAP61Q8NHU2 1237 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 ZCCHC14Q8WYQ9 949 aaKnown RBP19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 CDKL2Q92772 493 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 ATXN7L3BQ96GX2 97 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 FMO2Q99518 471 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 HGH1Q9BTY7 390 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 TSPYL1Q9H0U9 437 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 TRIT1Q9H3H1 467 aaKnown RBP19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 NSMCE4AQ9NXX6 385 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 SLC24A2Q9UI40 661 aa19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 RALYQ9UKM9 306 aaKnown RBP19.16■□□□□ 0.66
SHKBP1-214ENST00000597396 ANKRD12Q6UB98 2062 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 VPS26AO75436 327 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 GABRB3P28472 473 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 CCKBRP32239 447 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 DEKP35659 375 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 ABCG1P45844 678 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 ABRQ12979 859 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 PRKG2Q13237 762 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 TEX35Q5T0J7 233 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 TMEM71Q6P5X7 295 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 SLITRK4Q8IW52 837 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 TBC1D21Q8IYX1 336 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 OR4D9Q8NGE8 314 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 OR5AR1Q8NGP9 310 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 KCNJ9Q92806 393 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 NDNQ99608 321 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 GPR21Q99679 349 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 SEMA6CQ9H3T2 930 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 LATS2Q9NRM7 1088 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 GALPQ9UBC7 116 aa19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 TSR3Q9UJK0 312 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-214ENST00000597396 SPAG6O75602 509 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 RPN2P04844 631 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 HOXB3P14651 431 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 MPSTP25325 297 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 CAPZBP47756 277 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 LIMK2P53671 638 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 GPX6P59796 221 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 CFHR1Q03591 330 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 ZFP36L1Q07352 338 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 SNAP47Q5SQN1 464 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 UGT3A1Q6NUS8 523 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 WDR74Q6RFH5 385 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 ZNF574Q6ZN55 896 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 STRA8Q7Z7C7 330 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 SLC26A11Q86WA9 606 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 PLXDC1Q8IUK5 500 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 GPATCH11Q8N954 259 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 SIDT2Q8NBJ9 832 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 LCN9Q8WX39 176 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 RSC1A1Q92681 617 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 CCDC74BQ96LY2 380 aa19.14■□□□□ 0.65
SHKBP1-214ENST00000597396 FOPNLQ96NB1 174 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms