RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 KYNUQ16719 465 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 ZNF658BQ4V348 819 aaPredicted RBP9.66□□□□□ -0.86
LIG1-209ENST00000596104 DCAF10Q5QP82 559 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 BZW1Q7L1Q6 419 aaKnown RBP9.66□□□□□ -0.86
LIG1-209ENST00000596104 PID1Q7Z2X4 250 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 LUZP1Q86V48 1076 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 CFAP206Q8IYR0 622 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 OR4K2Q8NGD2 314 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 C5orf34Q96MH7 638 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 IP6K3Q96PC2 410 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 VAT1Q99536 393 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 GORASP1Q9BQQ3 440 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 CCM2Q9BSQ5 444 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 KLHL25Q9H0H3 589 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 OR52A5Q9H2C5 316 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 SRMSQ9H3Y6 488 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 TFB2MQ9H5Q4 396 aaKnown RBP9.66□□□□□ -0.86
LIG1-209ENST00000596104 ZNF552Q9H707 407 aaPredicted RBP9.66□□□□□ -0.86
LIG1-209ENST00000596104 ASB8Q9H765 288 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 DDX56Q9NY93 547 aaKnown RBP9.66□□□□□ -0.86
LIG1-209ENST00000596104 FKBPLQ9UIM3 349 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 PADI2Q9Y2J8 665 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 HYOU1Q9Y4L1 999 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 CELSR2Q9HCU4 2923 aa9.66□□□□□ -0.86
LIG1-209ENST00000596104 POLEQ07864 2286 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 C17orf113A0A1B0GUU1 675 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 HCRTR1O43613 425 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 CST8O60676 142 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 CNOT3O75175 753 aaKnown RBP9.65□□□□□ -0.86
LIG1-209ENST00000596104 AGTP01019 485 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 HBQ1P09105 142 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 CBSLP0DN79 551 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 AGXTP21549 392 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 TNFRSF8P28908 595 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 CBSP35520 551 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 TNNT3P45378 269 aaPredicted RBP9.65□□□□□ -0.86
LIG1-209ENST00000596104 SOX8P57073 446 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 MSLNQ13421 630 aaPredicted RBP9.65□□□□□ -0.86
LIG1-209ENST00000596104 TFDP2Q14188 446 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 KRT33BQ14525 404 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 SSPNQ14714 243 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 LLGL1Q15334 1064 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 TAF1AQ15573 450 aaPredicted RBP9.65□□□□□ -0.86
LIG1-209ENST00000596104 C1QL3Q5VWW1 255 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 Q6ZS92 163 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 ZC3H18Q86VM9 953 aaKnown RBP9.65□□□□□ -0.86
LIG1-209ENST00000596104 TMEM151BQ8IW70 566 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 RHOT2Q8IXI1 618 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 ADGRF3Q8IZF5 1079 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 GALNT16Q8N428 558 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 OR52E1Q8NGJ3 308 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 FER1L6-AS2Q96M78 137 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 GBP5Q96PP8 586 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 QKIQ96PU8 341 aaKnown RBP eCLIP9.65□□□□□ -0.86
LIG1-209ENST00000596104 FERD3LQ96RJ6 166 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 FSD1LQ9BXM9 530 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 SLC7A5P2Q9GIP4 190 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 COG4Q9H9E3 785 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 ZBTB20Q9HC78 741 aaPredicted RBP9.65□□□□□ -0.86
LIG1-209ENST00000596104 FAM60AQ9NP50 221 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 ACTR10Q9NZ32 417 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 PCDHGA10Q9Y5H3 936 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 CACNA1DQ01668 2161 aa9.65□□□□□ -0.86
LIG1-209ENST00000596104 LRBAP50851 2863 aa9.65□□□□□ -0.87
LIG1-209ENST00000596104 TEP1Q99973 2627 aaKnown RBP9.64□□□□□ -0.87
LIG1-209ENST00000596104 IGLV3-16A0A075B6K0 115 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 CCDC66A2RUB6 948 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 C5orf60A6NFR6 353 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 C2orf74A8MZ97 194 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 MASP2O00187 686 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 LDB2O43679 373 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 IPO13O94829 963 aaKnown RBP9.64□□□□□ -0.87
LIG1-209ENST00000596104 IGHEP01854 428 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 ALPPP05187 535 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 TNNT1P13805 278 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 COMTP21964 271 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 PDHA2P29803 388 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 ADRA1AP35348 466 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 SLC1A1P43005 524 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 CD151P48509 253 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 FOXL2P58012 376 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 OLIG2Q13516 323 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 BOP1Q14137 746 aaKnown RBP9.64□□□□□ -0.87
LIG1-209ENST00000596104 TCEAL1Q15170 157 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 ZIC1Q15915 447 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 C1orf189Q5VU69 101 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 MLIPQ5VWP3 458 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 LYPLAL1Q5VWZ2 237 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 KAZNQ674X7 775 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 RHBDD2Q6NTF9 364 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 CAVIN1Q6NZI2 390 aaKnown RBP9.64□□□□□ -0.87
LIG1-209ENST00000596104 SARM1Q6SZW1 724 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 RANBP10Q6VN20 620 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 PPP1R32Q7Z5V6 425 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 CUZD1Q86UP6 607 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 AMIGO1Q86WK6 493 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 NXPE1Q8N323 547 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 TTC13Q8NBP0 860 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 CLEC1AQ8NC01 280 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 PHC3Q8NDX5 983 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms