RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 CRYMQ14894 314 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 QPCTQ16769 361 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 ATXN7L2Q5T6C5 722 aaPredicted RBP12.63□□□□□ -0.39
SCAF1-202ENST00000595242 LGSNQ5TDP6 509 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 C6orf89Q6UWU4 347 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 CEACAM20Q6UY09 585 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 TIFABQ6ZNK6 161 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 MICALCLQ6ZW33 695 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 YTHDF3Q7Z739 585 aaKnown RBP12.63□□□□□ -0.39
SCAF1-202ENST00000595242 LINC00523Q86TU6 105 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 LRRC34Q8IZ02 419 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 SLC34A3Q8N130 599 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 ANKRD42Q8N9B4 389 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 PLA2G15Q8NCC3 412 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 FUBP1Q96AE4 644 aaKnown RBP12.63□□□□□ -0.39
SCAF1-202ENST00000595242 APOPT1Q96IL0 206 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 DPYSL5Q9BPU6 564 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 ZPBPQ9BS86 351 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 GLOD4Q9HC38 313 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 NDFIP2Q9NV92 336 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 SYBUQ9NX95 663 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 DKK3Q9UBP4 350 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 MOSPD1Q9UJG1 213 aa12.63□□□□□ -0.39
SCAF1-202ENST00000595242 AAR2Q9Y312 384 aaKnown RBP12.63□□□□□ -0.39
SCAF1-202ENST00000595242 CROCCQ5TZA2 2017 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 NAV3Q8IVL0 2385 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 IGHV1OR21-1A0A087WYE8 117 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 CXorf51AA0A1B0GTR3 108 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 MAGEB16A2A368 324 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 CXorf49A8MYA2 514 aaPredicted RBP12.62□□□□□ -0.39
SCAF1-202ENST00000595242 DFFAO00273 331 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 TNFRSF10CO14798 259 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 PPM1DO15297 605 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 DNAJB5O75953 348 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 ANXA9O76027 345 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 USP1O94782 785 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 SORBS2O94875 1100 aaKnown RBP12.62□□□□□ -0.39
SCAF1-202ENST00000595242 PEX11BO96011 259 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 JCHAINP01591 159 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 DHRS4L1P0CG22 281 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 PRF1P14222 555 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 KRT4P19013 534 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 XPAP23025 273 aaPredicted RBP12.62□□□□□ -0.39
SCAF1-202ENST00000595242 KELP23276 732 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 DLSTP36957 453 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 ACVRL1P37023 503 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 KIAA1024LP59773 190 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 PDK4Q16654 411 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 KRTAP21-3Q3LHN1 58 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 GKAP1Q5VSY0 366 aaPredicted RBP12.62□□□□□ -0.39
SCAF1-202ENST00000595242 TMEM71Q6P5X7 295 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 TRMT10BQ6PF06 316 aaKnown RBP12.62□□□□□ -0.39
SCAF1-202ENST00000595242 ARHGAP36Q6ZRI8 547 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 CPLX4Q7Z7G2 160 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 TMEM135Q86UB9 458 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 C4orf33Q8N1A6 199 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 ESX1Q8N693 406 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 PPM1NQ8N819 430 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 OR52K1Q8NGK4 314 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 DYDC1Q8WWB3 177 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 PATE1Q8WXA2 126 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 SEC16BQ96JE7 1060 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 FAM107BQ9H098 131 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 RABEP2Q9H5N1 569 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 FBXO8Q9NRD0 319 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 BFARQ9NZS9 450 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 OAS3Q9Y6K5 1087 aaKnown RBP12.62□□□□□ -0.39
SCAF1-202ENST00000595242 RPS6KL1Q9Y6S9 549 aa12.62□□□□□ -0.39
SCAF1-202ENST00000595242 FAM237BA0A1B0GVD1 139 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 A8MU76 341 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 SPAG7O75391 227 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 MT-ND3P03897 115 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 POLBP06746 335 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 TAC1P20366 129 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 CA4P22748 312 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 RPA3P35244 121 aaPredicted RBP12.61□□□□□ -0.39
SCAF1-202ENST00000595242 ADRA1AP35348 466 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 LIG3P49916 1009 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 PAPOLAP51003 745 aaKnown RBP12.61□□□□□ -0.39
SCAF1-202ENST00000595242 GEMP55040 296 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 SESN2P58004 480 aaPredicted RBP12.61□□□□□ -0.39
SCAF1-202ENST00000595242 YBEYP58557 167 aaPredicted RBP12.61□□□□□ -0.39
SCAF1-202ENST00000595242 RAD51Q06609 339 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 MGAT5Q09328 741 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 CDH17Q12864 832 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 ITIH4Q14624 930 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 AGERQ15109 404 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 INPP5JQ15735 1006 aaPredicted RBP12.61□□□□□ -0.39
SCAF1-202ENST00000595242 PARP15Q460N3 678 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 PRR30Q53SZ7 412 aaPredicted RBP12.61□□□□□ -0.39
SCAF1-202ENST00000595242 SNAP47Q5SQN1 464 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 CTAGE3PQ8IX95 158 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 TEX26Q8N6G2 289 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 MGARPQ8TDB4 240 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 CDKL2Q92772 493 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 MARVELD3Q96A59 401 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 MRRFQ96E11 262 aaKnown RBP12.61□□□□□ -0.39
SCAF1-202ENST00000595242 HMCESQ96FZ2 354 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 CERS2Q96G23 380 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 C5orf34Q96MH7 638 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms