RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 TRADDQ15628 312 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 INSCQ1MX18 579 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 PRSS53Q2L4Q9 553 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 ANKRD20A4Q4UJ75 823 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 KHDC1Q4VXA5 237 aaKnown RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 FASTKD1Q53R41 847 aaKnown RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 AARS2Q5JTZ9 985 aaKnown RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 LDLRAP1Q5SW96 308 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 SLC35F1Q5T1Q4 408 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 KIAA0930Q6ICG6 404 aaPredicted RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 MAMDC2Q7Z304 686 aaPredicted RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 SNX20Q7Z614 316 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 KCNMB4Q86W47 210 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 SERPINA9Q86WD7 417 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 GATAD2AQ86YP4 633 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 DCP2Q8IU60 420 aaKnown RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 PIANPQ8IYJ0 282 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 CBARPQ8N350 705 aaPredicted RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 FBXO36Q8NEA4 188 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 DDHD1Q8NEL9 900 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 ZNF398Q8TD17 642 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 COX14Q96I36 57 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 TTC25Q96NG3 672 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 PSMG3-AS1Q96PY0 264 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 VPS35Q96QK1 796 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 FMO2Q99518 471 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 ELF4Q99607 663 aaPredicted RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 COPS8Q99627 209 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 WDR83Q9BRX9 315 aaKnown RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 LRRC61Q9BV99 259 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 KIFC1Q9BW19 673 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 TEX101Q9BY14 249 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 OSGEPL1Q9H4B0 414 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 PPANQ9NQ55 473 aaKnown RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 TM7SF3Q9NS93 570 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 C20orf96Q9NUD7 363 aaPredicted RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 SMOXQ9NWM0 555 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 PRR13Q9NZ81 148 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 MARCH4Q9P2E8 410 aaPredicted RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 SLC17A6Q9P2U8 582 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 ZC3H7BQ9UGR2 993 aaKnown RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 RIMKLBQ9ULI2 386 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 PNMA8BQ9ULN7 279 aaPredicted RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 SUFUQ9UMX1 484 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 TRAF6Q9Y4K3 522 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 CABIN1Q9Y6J0 2220 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 PTPRZ1P23471 2315 aaPredicted RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 PIKFYVEQ9Y2I7 2098 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 ASCC3Q8N3C0 2202 aaKnown RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 SPTBN4Q9H254 2564 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 A0A1B0GTQ1 180 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 FAM237BA0A1B0GVD1 139 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 OR2AG2A6NM03 316 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 C4orf47A7E2U8 309 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 F8W735 103 aaPredicted RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 FAM229AH3BQW9 127 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 H7C0S8 307 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 CD3EAPO15446 510 aaKnown RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 AQP9O43315 295 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 BRINP1O60477 761 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 FOXD2O60548 495 aaPredicted RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 CDK14O94921 469 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 TTC4O95801 387 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 CSF2P04141 144 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 CEACAM5P06731 702 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 IVLP07476 585 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 ALPPL2P10696 532 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 ZNF8P17098 575 aaPredicted RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 RAB6AP20340 208 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 CA5AP35218 305 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 TRIM23P36406 574 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 ECI1P42126 302 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 SLC1A2P43004 574 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 PREPP48147 710 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 BLKP51451 505 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 HK3P52790 923 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 EIF3BP55884 814 aaKnown RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 XIAPP98170 497 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 ACVR1Q04771 509 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 ILF3Q12906 894 aaKnown RBP eCLIP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 CUL1Q13616 776 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 LONRF1Q17RB8 773 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 DEFB133Q30KQ1 61 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 GPR33Q49SQ1 333 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 SYTL3Q4VX76 610 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 GLE1Q53GS7 698 aaKnown RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 SPANXN3Q5MJ09 141 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 STPG1Q5TH74 334 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 MRNIPQ6NTE8 343 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 CDPF1Q6NVV7 123 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 SLC30A9Q6PML9 568 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 TAF8Q7Z7C8 310 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 ADGRG6Q86SQ4 1221 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 LDB1Q86U70 411 aaPredicted RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 ALYREFQ86V81 257 aaKnown RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 LRRTM4Q86VH4 590 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 IGDCC3Q8IVU1 814 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 NAXDQ8IW45 347 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 WDR75Q8IWA0 830 aaKnown RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 IFT20Q8IY31 132 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms