RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ZG16O60844 167 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 POLR2CP19387 275 aaPredicted RBP16.82■□□□□ 0.28
RETREG3-210ENST00000590541 TNNT3P45378 269 aaPredicted RBP16.82■□□□□ 0.28
RETREG3-210ENST00000590541 SSPNQ14714 243 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 PCSK7Q16549 785 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 METRNLQ641Q3 311 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 KAZNQ674X7 775 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 ARMC6Q6NXE6 501 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 TMEM220Q6QAJ8 160 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 CCDC50Q8IVM0 306 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 TXLNBQ8N3L3 684 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 ZADH2Q8N4Q0 377 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 CLEC1AQ8NC01 280 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 ZFPM2Q8WW38 1151 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 FER1L6-AS2Q96M78 137 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 IP6K3Q96PC2 410 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 FERMT1Q9BQL6 677 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 CEP41Q9BYV8 373 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 KIR3DX1Q9H7L2 352 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 AGPAT4Q9NRZ5 378 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 POMT2Q9UKY4 750 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 OSGIN2Q9Y236 505 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 CSAG2Q9Y5P2 127 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 DNMT3AQ9Y6K1 912 aaPredicted RBP16.82■□□□□ 0.28
RETREG3-210ENST00000590541 POLQO75417 2590 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 hCG_1818297A0A087WSY0 165 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 OR2AG2A6NM03 316 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 GPR39O43194 453 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 ZNF189O75820 626 aaPredicted RBP16.81■□□□□ 0.28
RETREG3-210ENST00000590541 NDST3O95803 873 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 EPOP01588 193 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 MSL3P1P0C860 447 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 CYP2A7P20853 494 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 CDH3P22223 829 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 PTPN3P26045 913 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 HADHAP40939 763 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 PER3P56645 1201 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 ADCY2Q08462 1091 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 SPDYE1Q8NFV5 336 aaPredicted RBP16.81■□□□□ 0.28
RETREG3-210ENST00000590541 TM9SF4Q92544 642 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 C12orf66Q96MD2 445 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 DPH2Q9BQC3 489 aaPredicted RBP16.81■□□□□ 0.28
RETREG3-210ENST00000590541 DHRS4Q9BTZ2 278 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 WWP1Q9H0M0 922 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 SYTL2Q9HCH5 934 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 IL26Q9NPH9 171 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 C1GALT1Q9NS00 363 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 FAM153AQ9UHL3 310 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 TRHDEQ9UKU6 1024 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 PADI2Q9Y2J8 665 aa16.81■□□□□ 0.28
RETREG3-210ENST00000590541 DIDO1Q9BTC0 2240 aaKnown RBP16.81■□□□□ 0.28
RETREG3-210ENST00000590541 F8P00451 2351 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 CCDC66A2RUB6 948 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 C9J4A7 227 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 PRSS44E7EML9 344 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 APOC4-APOC2K7ER74 178 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 LDB2O43679 373 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 UGT1A9O60656 530 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 IPO13O94829 963 aaKnown RBP16.8■□□□□ 0.28
RETREG3-210ENST00000590541 APOC2P02655 101 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 UGT1A6P19224 532 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 UGT1A1P22309 533 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 UGT1A4P22310 534 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 PBLDP30039 288 aaPredicted RBP16.8■□□□□ 0.28
RETREG3-210ENST00000590541 CTNNA1P35221 906 aaKnown RBP16.8■□□□□ 0.28
RETREG3-210ENST00000590541 CETN2P41208 172 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 PREPP48147 710 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 SOX8P57073 446 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 BBS12Q6ZW61 710 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 DDHD1Q8NEL9 900 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 DTX3LQ8TDB6 740 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 TRABDQ9H4I3 376 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 UGT1A7Q9HAW7 530 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 UGT1A10Q9HAW8 530 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 UGT1A8Q9HAW9 530 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 SAE1Q9UBE0 346 aaPredicted RBP16.8■□□□□ 0.28
RETREG3-210ENST00000590541 PCDHA3Q9Y5H8 950 aa16.8■□□□□ 0.28
RETREG3-210ENST00000590541 SOWAHDA6NJG2 315 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 ZNF749O43361 778 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 KLHL41O60662 606 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 MT-CYBP00156 380 aaPredicted RBP16.79■□□□□ 0.28
RETREG3-210ENST00000590541 ST6GAL1P15907 406 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 PECAM1P16284 738 aaPredicted RBP16.79■□□□□ 0.28
RETREG3-210ENST00000590541 HLA-DPA1P20036 260 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 AGXTP21549 392 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 HMGCLP35914 325 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 LMAN1P49257 510 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 NAP1L1P55209 391 aaKnown RBP16.79■□□□□ 0.28
RETREG3-210ENST00000590541 WASHC5Q12768 1159 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 LDLRAP1Q5SW96 308 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 ZDHHC20Q5W0Z9 365 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 ZC3H18Q86VM9 953 aaKnown RBP16.79■□□□□ 0.28
RETREG3-210ENST00000590541 BEND7Q8N7W2 519 aaPredicted RBP16.79■□□□□ 0.28
RETREG3-210ENST00000590541 OR4E2Q8NGC2 313 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 SPATA22Q8NHS9 363 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 ZCCHC2Q9C0B9 1178 aaKnown RBP16.79■□□□□ 0.28
RETREG3-210ENST00000590541 SLC7A5P2Q9GIP4 190 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 GOLPH3Q9H4A6 298 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 P4HTMQ9NXG6 502 aa16.79■□□□□ 0.28
RETREG3-210ENST00000590541 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms