RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 CPNE9Q8IYJ1 553 aa18.52■□□□□ 0.56
CLPTM1-209ENST00000588855 SLC44A1Q8WWI5 657 aa18.52■□□□□ 0.56
CLPTM1-209ENST00000588855 CAVIN3Q969G5 261 aa18.52■□□□□ 0.56
CLPTM1-209ENST00000588855 PAFAH2Q99487 392 aa18.52■□□□□ 0.56
CLPTM1-209ENST00000588855 CCDC3Q9BQI4 270 aa18.52■□□□□ 0.56
CLPTM1-209ENST00000588855 CAB39LQ9H9S4 337 aa18.52■□□□□ 0.56
CLPTM1-209ENST00000588855 KLHL42Q9P2K6 505 aa18.52■□□□□ 0.56
CLPTM1-209ENST00000588855 RUVBL2Q9Y230 463 aaKnown RBP18.52■□□□□ 0.56
CLPTM1-209ENST00000588855 EXOC1LA0A1B0GW35 172 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 POC1B-GALNT4F8VUJ3 575 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 RFPL3O75679 317 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 TUBBP07437 444 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 ITGA2BP08514 1039 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 FTH1P19P0C7X4 201 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 CD9P21926 228 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 TAS2R39P59534 338 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 ILF2Q12905 390 aaKnown RBP18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 ABRQ12979 859 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 PDAP1Q13442 181 aaKnown RBP18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 PAQR3Q6TCH7 311 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 SLCO6A1Q86UG4 719 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 AVL9Q8NBF6 648 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 PHC3Q8NDX5 983 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 SKA2Q8WVK7 121 aaPredicted RBP18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 TFGQ92734 400 aaPredicted RBP18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 SLC40A1Q9NP59 571 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 SLC39A10Q9ULF5 831 aa18.51■□□□□ 0.55
CLPTM1-209ENST00000588855 GP1BAP07359 652 aa18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 INHBAP08476 426 aa18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 ATP5DP30049 168 aa18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 HSD17B3P37058 310 aa18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 SKIV2L2P42285 1042 aaKnown RBP18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 BMPR2Q13873 1038 aa18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 GPR18Q14330 331 aa18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 PUM1Q14671 1186 aaKnown RBP eCLIP18.5■□□□□ 0.554e-7■□□□□ 10.1
CLPTM1-209ENST00000588855 NR1D2Q14995 579 aa18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 CEP97Q8IW35 865 aa18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 Q8N9G6 341 aaPredicted RBP18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 OR5AR1Q8NGP9 310 aa18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 CFAP61Q8NHU2 1237 aa18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 FERD3LQ96RJ6 166 aa18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 ASF1AQ9Y294 204 aa18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 HEBP2Q9Y5Z4 205 aa18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 NFS1Q9Y697 457 aa18.5■□□□□ 0.55
CLPTM1-209ENST00000588855 COL27A1Q8IZC6 1860 aaPredicted RBP18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 PNLIPP16233 465 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 GCAP28676 217 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 POU4F1Q01851 419 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 USP10Q14694 798 aaKnown RBP18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 TMEM26Q6ZUK4 368 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 SPRED1Q7Z699 444 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 DCAKDQ8WVC6 231 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 JPH3Q8WXH2 748 aaPredicted RBP18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 SH3KBP1Q96B97 665 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 SLC38A3Q99624 504 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 HGH1Q9BTY7 390 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 TBC1D10AQ9BXI6 508 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 PCDHGA1Q9Y5H4 931 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 IKBKGQ9Y6K9 419 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 HMX2A2RU54 273 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 SHBGP04278 402 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 CBSLP0DN79 551 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 ENO3P13929 434 aaPredicted RBP18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 ALDH4A1P30038 563 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 CBSP35520 551 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 MSH2P43246 934 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 ID4P47928 161 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 SLC12A2P55011 1212 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 OR1D5P58170 312 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 ILKQ13418 452 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 KRT33BQ14525 404 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 MROH9Q5TGP6 573 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 TMEM207Q6UWW9 146 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 PIWIL4Q7Z3Z4 852 aaKnown RBP18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 RBM12BQ8IXT5 1001 aaKnown RBP18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 EEF1AKMT1Q8WVE0 214 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 LINGO1Q96FE5 620 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 MVB12BQ9H7P6 319 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 UCK1Q9HA47 277 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 COLEC10Q9Y6Z7 277 aa18.49■□□□□ 0.55
CLPTM1-209ENST00000588855 UNC13CQ8NB66 2214 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 LILRA5A6NI73 299 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 PHGDHO43175 533 aaKnown RBP18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 B4GAT1O43505 415 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 DKK1O94907 266 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 TSPAN12O95859 305 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 MPC1LP0DKB6 136 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 ZNF37AP17032 561 aaPredicted RBP18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 NDUFS1P28331 727 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 GPR3P46089 330 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 BDKRB1P46663 353 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 PRKG2Q13237 762 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 PPM1JQ5JR12 505 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 UNC5DQ6UXZ4 953 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 NEK10Q6ZWH5 1172 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 CMC1Q7Z7K0 106 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 OR5K2Q8NHB8 316 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 TSPAN17Q96FV3 270 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 DHRS4Q9BTZ2 278 aa18.48■□□□□ 0.55
CLPTM1-209ENST00000588855 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms