RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CAPNS1P04632 268 aa19.69■□□□□ 0.74
DDX39A-207ENST00000588542 APOA4P06727 396 aa19.69■□□□□ 0.74
DDX39A-207ENST00000588542 C1QTNF9P0C862 333 aa19.69■□□□□ 0.74
DDX39A-207ENST00000588542 NDUFS1P28331 727 aa19.69■□□□□ 0.74
DDX39A-207ENST00000588542 GBX1Q14549 363 aa19.69■□□□□ 0.74
DDX39A-207ENST00000588542 RTP5Q14D33 572 aa19.69■□□□□ 0.74
DDX39A-207ENST00000588542 GSDMBQ8TAX9 411 aa19.69■□□□□ 0.74
DDX39A-207ENST00000588542 PYROXD1Q8WU10 500 aa19.69■□□□□ 0.74
DDX39A-207ENST00000588542 RSC1A1Q92681 617 aa19.69■□□□□ 0.74
DDX39A-207ENST00000588542 FERD3LQ96RJ6 166 aa19.69■□□□□ 0.74
DDX39A-207ENST00000588542 MVB12BQ9H7P6 319 aa19.69■□□□□ 0.74
DDX39A-207ENST00000588542 TPRP12270 2363 aaKnown RBP19.69■□□□□ 0.74
DDX39A-207ENST00000588542 ADAMTS20P59510 1910 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 PMS2P1A4D2B8 440 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 TMX2-CTNND1H3BSU7 103 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 KPNA5O15131 536 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 ZNF500O60304 480 aaPredicted RBP19.68■□□□□ 0.74
DDX39A-207ENST00000588542 AHSGP02765 367 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 THRAP10827 490 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 MPSTP25325 297 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 PLEKHS1Q5SXH7 462 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 UNQ6494/PRO21346Q6UXR6 183 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 KIAA0408Q6ZU52 694 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 OTOAQ7RTW8 1153 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 GALNT7Q86SF2 657 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 SPNS2Q8IVW8 549 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 LRRN4CLQ8ND94 238 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 OR5AR1Q8NGP9 310 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 FAM136AQ96C01 138 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 PRR11Q96HE9 360 aaPredicted RBP19.68■□□□□ 0.74
DDX39A-207ENST00000588542 CCDC74BQ96LY2 380 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 SLC30A3Q99726 388 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 L2HGDHQ9H9P8 463 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 PPANQ9NQ55 473 aaKnown RBP19.68■□□□□ 0.74
DDX39A-207ENST00000588542 FAM114A2Q9NRY5 505 aa19.68■□□□□ 0.74
DDX39A-207ENST00000588542 MN1Q10571 1320 aaPredicted RBP19.68■□□□□ 0.74
DDX39A-207ENST00000588542 DMXL2Q8TDJ6 3036 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 CCDC187A0A096LP49 1063 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 AMD1P17707 334 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 CHRM3P20309 590 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 SSTR1P30872 391 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 CAPZBP47756 277 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 PPM1FP49593 454 aaPredicted RBP19.67■□□□□ 0.74
DDX39A-207ENST00000588542 CLCN7P51798 805 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 GFERP55789 205 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 MGAT5Q09328 741 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 KRT33BQ14525 404 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 C16orf72Q14CZ0 275 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 PLCL1Q15111 1095 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 TMED2Q15363 201 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 PHF19Q5T6S3 580 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 CCDC25Q86WR0 208 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 RCBTB1Q8NDN9 531 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 ACVR1CQ8NER5 493 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 GIMAP7Q8NHV1 300 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 GABPB2Q8TAK5 448 aaPredicted RBP19.67■□□□□ 0.74
DDX39A-207ENST00000588542 NRTNQ99748 197 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 AARSD1Q9BTE6 412 aaKnown RBP19.67■□□□□ 0.74
DDX39A-207ENST00000588542 SATB2Q9UPW6 733 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 COMMD10Q9Y6G5 202 aa19.67■□□□□ 0.74
DDX39A-207ENST00000588542 C9P02748 559 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 MPOP05164 745 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 TPBGLP0DKB5 382 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 MAGEA4P43358 317 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 ABCG1P45844 678 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 GPX6P59796 221 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 TIAL1Q01085 375 aaKnown RBP eCLIP19.66■□□□□ 0.74
DDX39A-207ENST00000588542 PRKG2Q13237 762 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 TRA2AQ13595 282 aaKnown RBP eCLIP19.66■□□□□ 0.741e-6■□□□□ 10.9
DDX39A-207ENST00000588542 C3orf38Q5JPI3 329 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 CAPN12Q6ZSI9 719 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 PALM2Q8IXS6 379 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 TBC1D21Q8IYX1 336 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 OR52E1Q8NGJ3 308 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 OR5K2Q8NHB8 316 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 WDR36Q8NI36 951 aaKnown RBP19.66■□□□□ 0.74
DDX39A-207ENST00000588542 KCNJ9Q92806 393 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 C9orf72Q96LT7 481 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 HGH1Q9BTY7 390 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 STRADBQ9C0K7 418 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 RAB33BQ9H082 229 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 CCDC68Q9H2F9 335 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 POLR1BQ9H9Y6 1135 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 SMYD2Q9NRG4 433 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 EPHA6Q9UF33 1036 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 ASF1AQ9Y294 204 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 PSAT1Q9Y617 370 aa19.66■□□□□ 0.74
DDX39A-207ENST00000588542 MAP1BP46821 2468 aaKnown RBP19.65■□□□□ 0.74
DDX39A-207ENST00000588542 E5RI56 91 aa19.65■□□□□ 0.74
DDX39A-207ENST00000588542 CAPN5O15484 640 aaPredicted RBP19.65■□□□□ 0.74
DDX39A-207ENST00000588542 SNRNP200O75643 2136 aaKnown RBP19.65■□□□□ 0.74
DDX39A-207ENST00000588542 ECHS1P30084 290 aa19.65■□□□□ 0.74
DDX39A-207ENST00000588542 LSSP48449 732 aa19.65■□□□□ 0.74
DDX39A-207ENST00000588542 PPP1CAP62136 330 aa19.65■□□□□ 0.74
DDX39A-207ENST00000588542 GABREP78334 506 aa19.65■□□□□ 0.74
DDX39A-207ENST00000588542 CYP4F3Q08477 520 aa19.65■□□□□ 0.74
DDX39A-207ENST00000588542 ABRQ12979 859 aa19.65■□□□□ 0.74
DDX39A-207ENST00000588542 RBM20Q5T481 1227 aaKnown RBP19.65■□□□□ 0.74
DDX39A-207ENST00000588542 RAB11FIP2Q7L804 512 aa19.65■□□□□ 0.74
DDX39A-207ENST00000588542 ARHGAP22Q7Z5H3 698 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms