RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 INO80DQ53TQ3 878 aaPredicted RBP14.38□□□□□ -0.11
CCDC43-203ENST00000588210 KANK2Q63ZY3 851 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 ZNF549Q6P9A3 640 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 ERMP1Q7Z2K6 904 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 ARHGAP22Q7Z5H3 698 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 PGBD5Q8N414 524 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 PTGR2Q8N8N7 351 aaPredicted RBP14.38□□□□□ -0.11
CCDC43-203ENST00000588210 RHEBL1Q8TAI7 183 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 ATOH1Q92858 354 aaPredicted RBP14.38□□□□□ -0.11
CCDC43-203ENST00000588210 HOPXQ9BPY8 73 aaPredicted RBP14.38□□□□□ -0.11
CCDC43-203ENST00000588210 ANKRD60Q9BZ19 345 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 MTG2Q9H4K7 406 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 PNPLA3Q9NST1 481 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 ATXN10Q9UBB4 475 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 NDUFAF1Q9Y375 327 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 A0A0J9YYE9 177 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 CCDC160A6NGH7 325 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 ZNF839A8K0R7 811 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 K7ERQ8 282 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 LILRB5O75023 590 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 CDK14O94921 469 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 H6PDO95479 791 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 BMP2P12643 396 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 ZNF37AP17032 561 aaPredicted RBP14.38□□□□□ -0.11
CCDC43-203ENST00000588210 OGNP20774 298 aaKnown RBP14.38□□□□□ -0.11
CCDC43-203ENST00000588210 SH3BP2P78314 561 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 TIAL1Q01085 375 aaKnown RBP eCLIP14.38□□□□□ -0.11
CCDC43-203ENST00000588210 KIF19Q2TAC6 998 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 PPP4R4Q6NUP7 873 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 RAB44Q7Z6P3 723 aaPredicted RBP14.38□□□□□ -0.11
CCDC43-203ENST00000588210 PHYKPLQ8IUZ5 450 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 GOLM1Q8NBJ4 401 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 TSPAN14Q8NG11 270 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 TWIST2Q8WVJ9 160 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 ISG20Q96AZ6 181 aaKnown RBP14.38□□□□□ -0.11
CCDC43-203ENST00000588210 ERLEC1Q96DZ1 483 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 SLC29A1Q99808 456 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 TPSD1Q9BZJ3 242 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 TRIM15Q9C019 465 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 TMCO1Q9UM00 188 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 DNAJC15Q9Y5T4 150 aa14.38□□□□□ -0.11
CCDC43-203ENST00000588210 AQP12BA6NM10 295 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 H3BNH8 94 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 NR5A2O00482 541 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 NME4O00746 187 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 AZIN1O14977 448 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 HTRA2O43464 458 aaPredicted RBP14.37□□□□□ -0.11
CCDC43-203ENST00000588210 SMAD6O43541 496 aaKnown RBP14.37□□□□□ -0.11
CCDC43-203ENST00000588210 TMCC1O94876 653 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 MATN4O95460 622 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 FGF1P05230 155 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 HSD17B1P14061 328 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 HLA-DPA1P20036 260 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 ATP6V0D1P61421 351 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 ELAVL3Q14576 367 aaKnown RBP14.37□□□□□ -0.11
CCDC43-203ENST00000588210 USP39Q53GS9 565 aaKnown RBP14.37□□□□□ -0.11
CCDC43-203ENST00000588210 COQ5Q5HYK3 327 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 FAM219BQ5XKK7 198 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 AQP12AQ8IXF9 295 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 MIER2Q8N344 545 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 MINDY1Q8N5J2 469 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 PACRGLQ8N7B6 248 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.37□□□□□ -0.11
CCDC43-203ENST00000588210 SIPA1Q96FS4 1042 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 FEM1CQ96JP0 617 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 TBATAQ96M53 351 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 TCF12Q99081 682 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 SLC39A3Q9BRY0 314 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 TMEM79Q9BSE2 394 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 RSPH9Q9H1X1 276 aaPredicted RBP14.37□□□□□ -0.11
CCDC43-203ENST00000588210 TFB2MQ9H5Q4 396 aaKnown RBP14.37□□□□□ -0.11
CCDC43-203ENST00000588210 RIMKLBQ9ULI2 386 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 CRYL1Q9Y2S2 319 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 KCTD3Q9Y597 815 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 CEPT1Q9Y6K0 416 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 A0A1B0GTW7 788 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 CD3EAPO15446 510 aaKnown RBP14.37□□□□□ -0.11
CCDC43-203ENST00000588210 PRAMEF11O60813 436 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 ZNF217O75362 1048 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 TIPRLO75663 272 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 RPP40O75818 363 aaKnown RBP14.37□□□□□ -0.11
CCDC43-203ENST00000588210 GOT2P00505 430 aaKnown RBP14.37□□□□□ -0.11
CCDC43-203ENST00000588210 SLC4A1P02730 911 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 ALDH3B2P48448 385 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 CDH13P55290 713 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 FOXM1Q08050 763 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 BNIP2Q12982 314 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 OR4D1Q15615 310 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 SPATS1Q496A3 300 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 MRNIPQ6NTE8 343 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 C22orf39Q6P5X5 142 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 Q6ZVU0 165 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 PLPP6Q8IY26 295 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 EXT2Q93063 718 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 ATOH8Q96SQ7 321 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 CIB1Q99828 191 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 NOL11Q9H8H0 719 aaKnown RBP14.37□□□□□ -0.11
CCDC43-203ENST00000588210 PDFQ9HBH1 243 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 MID1IP1Q9NPA3 183 aa14.37□□□□□ -0.11
CCDC43-203ENST00000588210 CCM2LQ9NUG4 571 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms