RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 MFRPQ9BY79 579 aa13.65□□□□□ -0.22
DNMT1-213ENST00000587604 PITPNM3Q9BZ71 974 aa13.65□□□□□ -0.22
DNMT1-213ENST00000587604 SLC29A3Q9BZD2 475 aa13.65□□□□□ -0.22
DNMT1-213ENST00000587604 LUZP4Q9P127 313 aa13.65□□□□□ -0.22
DNMT1-213ENST00000587604 FKBPLQ9UIM3 349 aa13.65□□□□□ -0.22
DNMT1-213ENST00000587604 hCG_1818297A0A087WSY0 165 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 CCDC66A2RUB6 948 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 GSAPA4D1B5 854 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 HBQ1P09105 142 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 RNF224P0DH78 156 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 ST6GAL1P15907 406 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 PRLHRP49683 370 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 GEMP55040 296 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 XIAPP98170 497 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 MRPL49Q13405 166 aaKnown RBP13.64□□□□□ -0.23
DNMT1-213ENST00000587604 NCF4Q15080 339 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 FAM198BQ6UWH4 519 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 RCOR2Q8IZ40 523 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 HEXDCQ8WVB3 486 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 ULK4Q96C45 1275 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 FERD3LQ96RJ6 166 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 DHRS4Q9BTZ2 278 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 FICDQ9BVA6 458 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 SLC7A5P2Q9GIP4 190 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 GBA3Q9H227 469 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 TFB2MQ9H5Q4 396 aaKnown RBP13.64□□□□□ -0.23
DNMT1-213ENST00000587604 CASS4Q9NQ75 786 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 ABHD10Q9NUJ1 306 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 C5AR2Q9P296 337 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 CRLS1Q9UJA2 301 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 ALG6Q9Y672 507 aa13.64□□□□□ -0.23
DNMT1-213ENST00000587604 CRYBG3Q68DQ2 2970 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 DIDO1Q9BTC0 2240 aaKnown RBP13.63□□□□□ -0.23
DNMT1-213ENST00000587604 C9J4A7 227 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 CFAP99D6REC4 459 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 E7EQ34 232 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 IFRD1O00458 451 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-213ENST00000587604 BTN3A3O00478 584 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 BTN3A1O00481 513 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 CRTAMO95727 393 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 TPM1P09493 284 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 ATP1B2P14415 290 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-213ENST00000587604 AGXTP21549 392 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 ADRA1AP35348 466 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 HADHAP40939 763 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 CD151P48509 253 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 MSLNQ13421 630 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-213ENST00000587604 PTCHD3Q3KNS1 767 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 RAB43Q86YS6 212 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 KATNAL2Q8IYT4 538 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 NXPE1Q8N323 547 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 PRR7Q8TB68 274 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 HAUS1Q96CS2 278 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 SGSM3Q96HU1 749 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 IP6K3Q96PC2 410 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 TRAPPC9Q96Q05 1148 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 COPS8Q99627 209 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 C19orf43Q9BQ61 176 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 GORASP1Q9BQQ3 440 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 OR52A5Q9H2C5 316 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 MAP10Q9P2G4 905 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 PADI2Q9Y2J8 665 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 AAR2Q9Y312 384 aaKnown RBP13.63□□□□□ -0.23
DNMT1-213ENST00000587604 CELSR2Q9HCU4 2923 aa13.63□□□□□ -0.23
DNMT1-213ENST00000587604 PCSK5Q92824 1860 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 A1L4Q6 167 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 WIPF3A6NGB9 483 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 C2orf74A8MZ97 194 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 ZNF749O43361 778 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 CBFA2T2O43439 604 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 KLF7O75840 302 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-213ENST00000587604 RBL1P28749 1068 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 LMAN1P49257 510 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 HADHBP55084 474 aaKnown RBP13.62□□□□□ -0.23
DNMT1-213ENST00000587604 ATP1A4Q13733 1029 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 SSPNQ14714 243 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 PLEKHN1Q494U1 663 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-213ENST00000587604 VWA5B1Q5TIE3 1220 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 ZNF385CQ66K41 422 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-213ENST00000587604 ITPRIPL1Q6GPH6 555 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 SARM1Q6SZW1 724 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 BBS12Q6ZW61 710 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 SNX20Q7Z614 316 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 AMIGO1Q86WK6 493 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 OR52E1Q8NGJ3 308 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 SNRNP40Q96DI7 357 aaKnown RBP13.62□□□□□ -0.23
DNMT1-213ENST00000587604 RBM41Q96IZ5 413 aaKnown RBP13.62□□□□□ -0.23
DNMT1-213ENST00000587604 C17orf62Q9BQA9 187 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 APOL2Q9BQE5 337 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 FERMT1Q9BQL6 677 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 MVB12BQ9H7P6 319 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 COG4Q9H9E3 785 aa13.62□□□□□ -0.23
DNMT1-213ENST00000587604 SNRNP200O75643 2136 aaKnown RBP13.61□□□□□ -0.23
DNMT1-213ENST00000587604 DOCK10Q96BY6 2186 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 H7C0C1 242 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 APOC4-APOC2K7ER74 178 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 MFAP3LO75121 409 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 APOC2P02655 101 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 PVRP15151 417 aa13.61□□□□□ -0.23
DNMT1-213ENST00000587604 ITGALP20701 1170 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms