RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 KRT16P08779 473 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 GSTM1P09488 218 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 AP1S2P56377 157 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 CDK3Q00526 305 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 GSTM4Q03013 218 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 ABRQ12979 859 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 KLF10Q13118 480 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 SGCGQ13326 291 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 RINLQ6ZS11 566 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 EFL1Q7Z2Z2 1120 aaKnown RBP19.42■□□□□ 0.7
TRIM47-204ENST00000587339 TCAIMQ8N3R3 496 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 CPSF7Q8N684 471 aaKnown RBP19.42■□□□□ 0.7
TRIM47-204ENST00000587339 DCBLD1Q8N8Z6 715 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 MSANTD3Q96H12 275 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 C3orf30Q96M34 536 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 CDK15Q96Q40 435 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 RAB3IPQ96QF0 476 aaPredicted RBP19.42■□□□□ 0.7
TRIM47-204ENST00000587339 NUSAP1Q9BXS6 441 aaKnown RBP19.42■□□□□ 0.7
TRIM47-204ENST00000587339 SLC40A1Q9NP59 571 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 TAS2R1Q9NYW7 299 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 GULP1Q9UBP9 304 aa19.42■□□□□ 0.7
TRIM47-204ENST00000587339 B2RBV5 119 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 OR7A17O14581 309 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 LIN7AO14910 233 aaPredicted RBP19.41■□□□□ 0.7
TRIM47-204ENST00000587339 STK16O75716 305 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 HNMTP50135 292 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 MNAT1P51948 309 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 ADPRHP54922 357 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 ERVPABLB-1P60509 514 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 SMAD2Q15796 467 aaKnown RBP19.41■□□□□ 0.7
TRIM47-204ENST00000587339 KIAA1161Q6NSJ0 714 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 LARP4Q71RC2 724 aaKnown RBP eCLIP19.41■□□□□ 0.73e-9■□□□□ 8.9
TRIM47-204ENST00000587339 ZNF547Q8IVP9 402 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 CFAP206Q8IYR0 622 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 SLC22A15Q8IZD6 547 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 CFAP61Q8NHU2 1237 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 HLA-CQ95604 372 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 MARK4Q96L34 752 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 LINC00615Q96LM1 132 aaPredicted RBP19.41■□□□□ 0.7
TRIM47-204ENST00000587339 TUBB1Q9H4B7 451 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 ZNF385DQ9H6B1 395 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 TMEM98Q9Y2Y6 226 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 H3BM21 787 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 UBDO15205 165 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 SLC22A2O15244 555 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 CD72P21854 359 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 MAP4P27816 1152 aaKnown RBP19.41■□□□□ 0.7
TRIM47-204ENST00000587339 ADSLP30566 484 aaPredicted RBP19.41■□□□□ 0.7
TRIM47-204ENST00000587339 MAPK9P45984 424 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 CCNG1P51959 295 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 CDC16Q13042 620 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 CCINQ13939 588 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 INPP5AQ14642 412 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 NAA25Q14CX7 972 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 ZNF658BQ4V348 819 aaPredicted RBP19.41■□□□□ 0.7
TRIM47-204ENST00000587339 EOGTQ5NDL2 527 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 LETMD1Q6P1Q0 360 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 CRTC3Q6UUV7 619 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 CHSY3Q70JA7 882 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 POU5F2Q8N7G0 328 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 CDYL2Q8N8U2 506 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 KLK6Q92876 244 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 C1QTNF2Q9BXJ5 285 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 OSBPL6Q9BZF3 934 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 MBNL1Q9NR56 388 aaKnown RBP19.41■□□□□ 0.7
TRIM47-204ENST00000587339 KLC4Q9NSK0 619 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 MRGBPQ9NV56 204 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 BTRCQ9Y297 605 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 PTGDR2Q9Y5Y4 395 aa19.41■□□□□ 0.7
TRIM47-204ENST00000587339 COPG1Q9Y678 874 aaKnown RBP19.41■□□□□ 0.7
TRIM47-204ENST00000587339 TRPM6Q9BX84 2022 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 TBC1D3DA0A087WVF3 549 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 TBC1D3IA0A087WXS9 549 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 TBC1D3EA0A087X179 549 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 TBC1D3KA0A087X1G2 549 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 LOC100653049A0A140TA62 436 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 C17orf113A0A1B0GUU1 675 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 A0A1W2PQU0 124 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 TBC1D3FA6NER0 549 aaPredicted RBP19.4■□□□□ 0.7
TRIM47-204ENST00000587339 TBC1D3LB9A6J9 549 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 PSIP1O75475 530 aaKnown RBP19.4■□□□□ 0.7
TRIM47-204ENST00000587339 POP7O75817 140 aaKnown RBP19.4■□□□□ 0.7
TRIM47-204ENST00000587339 KRT34O76011 436 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 TBC1D3HP0C7X1 549 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 LINC00032P0C843 101 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 ACADMP11310 421 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 SRFP11831 508 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 EPB42P16452 691 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 PDHA2P29803 388 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 GGT5P36269 586 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 FGL2Q14314 439 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 SLC44A4Q53GD3 710 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 TBC1D3GQ6DHY5 549 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 TBC1D3CQ6IPX1 549 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 TTC23LQ6PF05 361 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 DOK6Q6PKX4 331 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 KBTBD6Q86V97 674 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 RASGRP3Q8IV61 690 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 TBC1D3Q8IZP1 549 aaPredicted RBP19.4■□□□□ 0.7
TRIM47-204ENST00000587339 OR4F6Q8NGB9 312 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms