RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 H3BMH7 237 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 BTN3A1O00481 513 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 ZNF749O43361 778 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 PSTPIP1O43586 416 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 SPOPO43791 374 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 ANXA9O76027 345 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 CBX6O95503 412 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 RBL1P28749 1068 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 HADHAP40939 763 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 CD151P48509 253 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 GEMP55040 296 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 RRADP55042 308 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 HADHBP55084 474 aaKnown RBP14.03□□□□□ -0.16
SDF2-202ENST00000585428 TRIM14Q14142 442 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 SSPNQ14714 243 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 KATNAL2Q8IYT4 538 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 ADGRF3Q8IZF5 1079 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 PRR7Q8TB68 274 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 HM13Q8TCT9 377 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 SNRNP40Q96DI7 357 aaKnown RBP14.03□□□□□ -0.16
SDF2-202ENST00000585428 DCUN1D1Q96GG9 259 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 GBA3Q9H227 469 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 C10orf88Q9H8K7 445 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 CASS4Q9NQ75 786 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 GPR83Q9NYM4 423 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 LUZP4Q9P127 313 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 FAM8A1Q9UBU6 413 aa14.03□□□□□ -0.16
SDF2-202ENST00000585428 TNRC6AQ8NDV7 1962 aaKnown RBP14.03□□□□□ -0.16
SDF2-202ENST00000585428 IGLV3-16A0A075B6K0 115 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 TPM3P06753 285 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 HBQ1P09105 142 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 RALBP11234 206 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 CYP2A7P20853 494 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 PDHA2P29803 388 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 OLIG2Q13516 323 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 ATP1A4Q13733 1029 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 NCF4Q15080 339 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 PTCHD3Q3KNS1 767 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 CRB2Q5IJ48 1285 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 DENND5AQ6IQ26 1287 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 IGFL3Q6UXB1 125 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 CDHR3Q6ZTQ4 885 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 BBS12Q6ZW61 710 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 AMIGO1Q86WK6 493 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 NXPE1Q8N323 547 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 OR13C4Q8NGS5 318 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 HEXDCQ8WVB3 486 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 ULK4Q96C45 1275 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 HAUS1Q96CS2 278 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 BARD1Q99728 777 aaKnown RBP14.02□□□□□ -0.17
SDF2-202ENST00000585428 DHRS4Q9BTZ2 278 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 FICDQ9BVA6 458 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 FAM96AQ9H5X1 160 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 MVB12BQ9H7P6 319 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 ARNT2Q9HBZ2 717 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 G3BP2Q9UN86 482 aaKnown RBP14.02□□□□□ -0.17
SDF2-202ENST00000585428 ICE1Q9Y2F5 2266 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 MED13Q9UHV7 2174 aa14.02□□□□□ -0.17
SDF2-202ENST00000585428 GSAPA4D1B5 854 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 E7EQ34 232 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 MAP3K7O43318 606 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 KRT86O43790 486 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 CRTAMO95727 393 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 CLDN1O95832 211 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 AGXTP21549 392 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 GABRA4P48169 554 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 LMAN1P49257 510 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 CDKN1CP49918 316 aaPredicted RBP14.01□□□□□ -0.17
SDF2-202ENST00000585428 SOX8P57073 446 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 SNX20Q7Z614 316 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 OR52E1Q8NGJ3 308 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 TCTN2Q96GX1 697 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 SGSM3Q96HU1 749 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 IP6K3Q96PC2 410 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 COPS8Q99627 209 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 HEMGNQ9BXL5 484 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 CHRNA10Q9GZZ6 450 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 KLHL25Q9H0H3 589 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 COG4Q9H9E3 785 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 FAM60AQ9NP50 221 aa14.01□□□□□ -0.17
SDF2-202ENST00000585428 AAR2Q9Y312 384 aaKnown RBP14.01□□□□□ -0.17
SDF2-202ENST00000585428 PRRC2CQ9Y520 2896 aaKnown RBP14.01□□□□□ -0.17
SDF2-202ENST00000585428 TRBV5-4A0A0C4DH59 114 aa14□□□□□ -0.17
SDF2-202ENST00000585428 A1L4Q6 167 aa14□□□□□ -0.17
SDF2-202ENST00000585428 C2orf74A8MZ97 194 aa14□□□□□ -0.17
SDF2-202ENST00000585428 APOC4-APOC2K7ER74 178 aa14□□□□□ -0.17
SDF2-202ENST00000585428 HCRTR1O43613 425 aa14□□□□□ -0.17
SDF2-202ENST00000585428 LDB2O43679 373 aa14□□□□□ -0.17
SDF2-202ENST00000585428 LDLRP01130 860 aa14□□□□□ -0.17
SDF2-202ENST00000585428 APOC2P02655 101 aa14□□□□□ -0.17
SDF2-202ENST00000585428 CBSLP0DN79 551 aa14□□□□□ -0.17
SDF2-202ENST00000585428 PVRP15151 417 aa14□□□□□ -0.17
SDF2-202ENST00000585428 CBSP35520 551 aa14□□□□□ -0.17
SDF2-202ENST00000585428 ZNF140P52738 457 aaPredicted RBP14□□□□□ -0.17
SDF2-202ENST00000585428 RPA4Q13156 261 aa14□□□□□ -0.17
SDF2-202ENST00000585428 BOP1Q14137 746 aaKnown RBP14□□□□□ -0.17
SDF2-202ENST00000585428 GPR33Q49SQ1 333 aa14□□□□□ -0.17
SDF2-202ENST00000585428 ANKRD20A2Q5SQ80 823 aa14□□□□□ -0.17
SDF2-202ENST00000585428 VWA5B1Q5TIE3 1220 aa14□□□□□ -0.17
SDF2-202ENST00000585428 ANKRD20A1Q5TYW2 823 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms