RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SNX7Q9UNH6 387 aa14.58□□□□□ -0.08
VAPA-209ENST00000585042 MAP4K5Q9Y4K4 846 aa14.58□□□□□ -0.08
VAPA-209ENST00000585042 PCDHA13Q9Y5I0 950 aa14.58□□□□□ -0.08
VAPA-209ENST00000585042 USP9XQ93008 2570 aaPredicted RBP14.58□□□□□ -0.08
VAPA-209ENST00000585042 TRBV5-4A0A0C4DH59 114 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 CCDC66A2RUB6 948 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 ARGFXA6NJG6 315 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 H7C0S8 307 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 DPM1O60762 260 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 TMEM63AO94886 807 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 CD63P08962 238 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 CTNNA1P35221 906 aaKnown RBP14.57□□□□□ -0.08
VAPA-209ENST00000585042 CETN2P41208 172 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 ZNF75DP51815 510 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 VAV2P52735 878 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 ZNF140P52738 457 aaPredicted RBP14.57□□□□□ -0.08
VAPA-209ENST00000585042 RRADP55042 308 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 SPA17Q15506 151 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 ZNF658BQ4V348 819 aaPredicted RBP14.57□□□□□ -0.08
VAPA-209ENST00000585042 FHL5Q5TD97 284 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 DENND5AQ6IQ26 1287 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 DUS1LQ6P1R4 473 aaKnown RBP14.57□□□□□ -0.08
VAPA-209ENST00000585042 GLIS1Q8NBF1 620 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 ACTL9Q8TC94 416 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 IP6K3Q96PC2 410 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 C17orf62Q9BQA9 187 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 DHRS4Q9BTZ2 278 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 CHRNA10Q9GZZ6 450 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 OR52A5Q9H2C5 316 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 GOLPH3Q9H4A6 298 aa14.57□□□□□ -0.08
VAPA-209ENST00000585042 ACTR5Q9H9F9 607 aaPredicted RBP14.57□□□□□ -0.08
VAPA-209ENST00000585042 RP1L1Q8IWN7 2480 aaPredicted RBP14.56□□□□□ -0.08
VAPA-209ENST00000585042 BLACEA4D250 179 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 C2orf74A8MZ97 194 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 KLHL41O60662 606 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 SORBS2O94875 1100 aaKnown RBP14.56□□□□□ -0.08
VAPA-209ENST00000585042 CAPN1P07384 714 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 RBP3P10745 1247 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 CYP2A7P20853 494 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 AGXTP21549 392 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 CTNNA2P26232 953 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 PSMB4P28070 264 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 PTGIRP43119 386 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 MARCKSL1P49006 195 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 EIF3EP60228 445 aaKnown RBP14.56□□□□□ -0.08
VAPA-209ENST00000585042 OTUD4Q01804 1114 aaKnown RBP14.56□□□□□ -0.08
VAPA-209ENST00000585042 ZNF789Q5FWF6 425 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 CPZQ66K79 652 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 DARS2Q6PI48 645 aaKnown RBP14.56□□□□□ -0.08
VAPA-209ENST00000585042 AMIGO1Q86WK6 493 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 LILRA3Q8N6C8 439 aaPredicted RBP14.56□□□□□ -0.08
VAPA-209ENST00000585042 ENDOVQ8N8Q3 282 aaKnown RBP14.56□□□□□ -0.08
VAPA-209ENST00000585042 OR13C4Q8NGS5 318 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 OR1L3Q8NH93 324 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 KRT35Q92764 455 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.56□□□□□ -0.08
VAPA-209ENST00000585042 PPM1MQ96MI6 270 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 SPATA13Q96N96 652 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 TRAPPC9Q96Q05 1148 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 TBL1YQ9BQ87 522 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 TLR10Q9BXR5 811 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 OSBPL8Q9BZF1 889 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 COG4Q9H9E3 785 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 PCMTD2Q9NV79 361 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 CUEDC1Q9NWM3 386 aaPredicted RBP14.56□□□□□ -0.08
VAPA-209ENST00000585042 C5AR2Q9P296 337 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 SEC16AO15027 2179 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 MED13Q9UHV7 2174 aa14.56□□□□□ -0.08
VAPA-209ENST00000585042 GSAPA4D1B5 854 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 TMEM150CB9EJG8 249 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 E7EQ34 232 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 QSOX1O00391 747 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 KCNN4O15554 427 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 PJA2O43164 708 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 LDB2O43679 373 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 AP2A2O94973 939 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 TJP3O95049 919 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 IGHEP01854 428 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 ACRV1P26436 265 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 CYLC1P35663 651 aaPredicted RBP14.55□□□□□ -0.08
VAPA-209ENST00000585042 ARCN1P48444 511 aaKnown RBP14.55□□□□□ -0.08
VAPA-209ENST00000585042 ITGA1P56199 1179 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 ABRQ12979 859 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 BOP1Q14137 746 aaKnown RBP14.55□□□□□ -0.08
VAPA-209ENST00000585042 LCN10Q6JVE6 187 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 FBXO38Q6PIJ6 1188 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 GAS2L3Q86XJ1 694 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 SYTL1Q8IYJ3 562 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 TC2NQ8N9U0 490 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 TFGQ92734 400 aaPredicted RBP14.55□□□□□ -0.08
VAPA-209ENST00000585042 SMAD5Q99717 465 aaKnown RBP14.55□□□□□ -0.08
VAPA-209ENST00000585042 APOL2Q9BQE5 337 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 SLC7A5P2Q9GIP4 190 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 C10orf88Q9H8K7 445 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 NLE1Q9NVX2 485 aaPredicted RBP14.55□□□□□ -0.08
VAPA-209ENST00000585042 FAM8A1Q9UBU6 413 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 PADI2Q9Y2J8 665 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 AP1M2Q9Y6Q5 423 aa14.55□□□□□ -0.08
VAPA-209ENST00000585042 GOLGA6L6A8MZA4 724 aa14.54□□□□□ -0.08
VAPA-209ENST00000585042 C9J4A7 227 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms