RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 RBM38Q9H0Z9 239 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PCDH12Q9NPG4 1184 aa14.73□□□□□ -0.05
CDK5RAP3-236ENST00000584991 SDR39U1Q9NRG7 319 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PNPLA3Q9NST1 481 aa14.73□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PTBP2Q9UKA9 531 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-236ENST00000584991 DNAJC15Q9Y5T4 150 aa14.73□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ZNF106Q9H2Y7 1883 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-236ENST00000584991 CKAP5Q14008 2032 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 KANSL1LA0AUZ9 987 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 GOLGA8CPA6NN73 597 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 SYCE1LA8MT33 242 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 VILLO15195 856 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PGM3O95394 542 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 NPPAP01160 153 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 LBPP18428 481 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TCN1P20061 433 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 CDKN1CP49918 316 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TFF2Q03403 129 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ENPP2Q13822 863 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 INPP5AQ14642 412 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PPP1R3AQ16821 1122 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 C2orf27AQ580R0 203 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ZRANB3Q5FWF4 1079 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TMEM196Q5HYL7 178 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 C6orf10Q5SRN2 563 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 CARM1Q86X55 608 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 FUNDC1Q8IVP5 155 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 GALNT4Q8N4A0 578 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 MFSD2AQ8NA29 543 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 KIAA1191Q96A73 305 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ARRDC3Q96B67 414 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 SLCO4A1Q96BD0 722 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ATOH8Q96SQ7 321 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 AARSD1Q9BTE6 412 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 NUSAP1Q9BXS6 441 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ANKRD60Q9BZ19 345 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 COQ10BQ9H8M1 238 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 AKTIPQ9H8T0 292 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TNFRSF12AQ9NP84 129 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TUBA8Q9NY65 449 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 FIS1Q9Y3D6 152 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 NPC1O15118 1278 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PFDN6O15212 129 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 KERAO60938 352 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 CDK14O94921 469 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 H6PDO95479 791 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 C1SP09871 688 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 FCGR1AP12314 374 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ZNF23P17027 643 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 BPIP17213 487 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 IL10P22301 178 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 NFKBIAP25963 317 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ITGB7P26010 798 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 VIPR1P32241 457 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 KCNC1P48547 511 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 STC1P52823 247 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 SH3BP2P78314 561 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 CDKL1Q00532 357 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ARHGEF7Q14155 803 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.72□□□□□ -0.051e-6■□□□□ 10.2
CDK5RAP3-236ENST00000584991 NADK2Q4G0N4 442 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 HABP4Q5JVS0 413 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 C6orf52Q5T4I8 152 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 LCN8Q6JVE9 175 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PSAPL1Q6NUJ1 521 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 FAM151BQ6UXP7 276 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 RBM44Q6ZP01 1051 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ERMP1Q7Z2K6 904 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 DSG4Q86SJ6 1040 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 CHCHD4Q8N4Q1 142 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PTERQ96BW5 349 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PRPF18Q99633 342 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 UNKQ9C0B0 810 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PCDHAC1Q9H158 963 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TIMMDC1Q9NPL8 285 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ACTR3BQ9P1U1 418 aa14.72□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PLK4O00444 970 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 STX16O14662 325 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ANGPT2O15123 496 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 UMPSP11172 480 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 MTHFD2P13995 350 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 DRD1P21728 446 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 GRSF1Q12849 480 aaKnown RBP eCLIP14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 LCP2Q13094 533 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TDGQ13569 410 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ZNF549Q6P9A3 640 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PRR23BQ6ZRT6 265 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 RFLNAQ6ZTI6 216 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PIANPQ8IYJ0 282 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PTGR2Q8N8N7 351 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 FAM156AQ8NDB6 213 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TWIST2Q8WVJ9 160 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 LRTOMTQ8WZ04 291 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 GFM2Q969S9 779 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 HIC2Q96JB3 615 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 C19orf43Q9BQ61 176 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TRIM54Q9BYV2 358 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TAS2R13Q9NYV9 303 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 MYRFQ9Y2G1 1151 aa14.71□□□□□ -0.05
CDK5RAP3-236ENST00000584991 CRYL1Q9Y2S2 319 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms