RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TMPRSS15P98073 1019 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 CKAP4Q07065 602 aaKnown RBP15.28■□□□□ 0.04
SKA2-209ENST00000583976 TMEM115Q12893 351 aaPredicted RBP15.28■□□□□ 0.04
SKA2-209ENST00000583976 MSLNQ13421 630 aaPredicted RBP15.28■□□□□ 0.04
SKA2-209ENST00000583976 IL10RAQ13651 578 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 GTF2H3Q13889 308 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 IL11RAQ14626 422 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 TAF1AQ15573 450 aaPredicted RBP15.28■□□□□ 0.04
SKA2-209ENST00000583976 CHRNA6Q15825 494 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 RPE65Q16518 533 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 CCDC38Q502W7 563 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 ANKRD22Q5VYY1 191 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 PWWP2BQ6NUJ5 590 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 WASH2PQ6VEQ5 465 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 PPP1R3BQ86XI6 285 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 BEND7Q8N7W2 519 aaPredicted RBP15.28■□□□□ 0.04
SKA2-209ENST00000583976 OR4K2Q8NGD2 314 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 CPT1BQ92523 772 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 SLCO2A1Q92959 643 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 RUNDC3BQ96NL0 473 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 UGT1A7Q9HAW7 530 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 UGT1A10Q9HAW8 530 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 UGT1A8Q9HAW9 530 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 LHX9Q9NQ69 397 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 CASS4Q9NQ75 786 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 WASH6PQ9NQA3 447 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 EIF2B3Q9NR50 452 aaKnown RBP15.28■□□□□ 0.04
SKA2-209ENST00000583976 IL17CQ9P0M4 197 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 FAM8A1Q9UBU6 413 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 TLK1Q9UKI8 766 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 MAN2B2Q9Y2E5 1009 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 PKP3Q9Y446 797 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 PCDHB3Q9Y5E6 796 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 MKRN2OSH3BPM6 223 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 GOLGA8MH3BSY2 632 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 CREG1O75629 220 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 CRTAMO95727 393 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 NTRK1P04629 796 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 LPOP22079 712 aaPredicted RBP15.27■□□□□ 0.04
SKA2-209ENST00000583976 SPAM1P38567 509 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 HALP42357 657 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 ARCN1P48444 511 aaKnown RBP15.27■□□□□ 0.04
SKA2-209ENST00000583976 SESN2P58004 480 aaPredicted RBP15.27■□□□□ 0.04
SKA2-209ENST00000583976 PTK6Q13882 451 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 KCNJ11Q14654 390 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 PLCL1Q15111 1095 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 WHAMMP3Q1A5X7 153 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.27■□□□□ 0.04
SKA2-209ENST00000583976 GPRC6AQ5T6X5 926 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 FAM199XQ6PEV8 388 aaPredicted RBP15.27■□□□□ 0.04
SKA2-209ENST00000583976 FBXO38Q6PIJ6 1188 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 ASB18Q6ZVZ8 466 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 MICALCLQ6ZW33 695 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 DET1Q7L5Y6 550 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 SIDT2Q8NBJ9 832 aaKnown RBP15.27■□□□□ 0.04
SKA2-209ENST00000583976 OR13C4Q8NGS5 318 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 ZDHHC12Q96GR4 267 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 SLC41A2Q96JW4 573 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 PPM1MQ96MI6 270 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 MAP3K3Q99759 626 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 TRIM31Q9BZY9 425 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 IMP3Q9NV31 184 aaKnown RBP15.27■□□□□ 0.04
SKA2-209ENST00000583976 EPHA6Q9UF33 1036 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 MRFAP1Q9Y605 127 aa15.27■□□□□ 0.04
SKA2-209ENST00000583976 PIPSLA2A3N6 862 aa15.26■□□□□ 0.03
SKA2-209ENST00000583976 LDB2O43679 373 aa15.26■□□□□ 0.03
SKA2-209ENST00000583976 TMEM63AO94886 807 aa15.26■□□□□ 0.03
SKA2-209ENST00000583976 VCLP18206 1134 aa15.26■□□□□ 0.03
SKA2-209ENST00000583976 TPSB2P20231 275 aa15.26■□□□□ 0.03
SKA2-209ENST00000583976 DMPKQ09013 629 aa15.26■□□□□ 0.03
SKA2-209ENST00000583976 DHX34Q14147 1143 aaKnown RBP15.26■□□□□ 0.03
SKA2-209ENST00000583976 TPSAB1Q15661 275 aa15.26■□□□□ 0.03
SKA2-209ENST00000583976 FAM69BQ5VUD6 431 aa15.26■□□□□ 0.03
SKA2-209ENST00000583976 HIST2H2BCQ6DN03 193 aa15.26■□□□□ 0.03
SKA2-209ENST00000583976 SYDE1Q6ZW31 735 aaPredicted RBP15.26■□□□□ 0.03
SKA2-209ENST00000583976 AMZ2Q86W34 360 aa15.26■□□□□ 0.03
SKA2-209ENST00000583976 RBM12BQ8IXT5 1001 aaKnown RBP15.26■□□□□ 0.03
SKA2-209ENST00000583976 DDHD1Q8NEL9 900 aa15.26■□□□□ 0.03
SKA2-209ENST00000583976 RARRES3Q9UL19 164 aa15.26■□□□□ 0.03
SKA2-209ENST00000583976 PCDHGA6Q9Y5G7 932 aa15.26■□□□□ 0.03
SKA2-209ENST00000583976 PCSK5Q92824 1860 aa15.26■□□□□ 0.03
SKA2-209ENST00000583976 SPTBN1Q01082 2364 aaKnown RBP15.26■□□□□ 0.03
SKA2-209ENST00000583976 GLYATL1P3A0A0U1RQE8 302 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 BLACEA4D250 179 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 CCL22O00626 93 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 DNALI1O14645 258 aaPredicted RBP15.25■□□□□ 0.03
SKA2-209ENST00000583976 RAD51CO43502 376 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 AVILO75366 819 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 POP7O75817 140 aaKnown RBP15.25■□□□□ 0.03
SKA2-209ENST00000583976 MTHFD1P11586 935 aaKnown RBP15.25■□□□□ 0.03
SKA2-209ENST00000583976 MGAT1P26572 445 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 DEKP35659 375 aaKnown RBP15.25■□□□□ 0.03
SKA2-209ENST00000583976 CRADDP78560 199 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 SARNPP82979 210 aaKnown RBP15.25■□□□□ 0.03
SKA2-209ENST00000583976 CDK16Q00536 496 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 LAMB3Q13751 1172 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 GPR19Q15760 415 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 DNTTIP2Q5QJE6 756 aaKnown RBP15.25■□□□□ 0.03
SKA2-209ENST00000583976 PRAMEF17Q5VTA0 474 aa15.25■□□□□ 0.03
SKA2-209ENST00000583976 IZUMO3Q5VZ72 239 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms