RNA–Protein interactions for RNA: ENST00000583517.1

NLK-204, Transcript of nemo like kinase, humanhuman

TSL 3

Gene NLK, Length 695 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-204ENST00000583517 ITGA1P56199 1179 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 COPS2P61201 443 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 KRT33BQ14525 404 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 ANKRD20A2Q5SQ80 823 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 ANKRD20A1Q5TYW2 823 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 FAM69BQ5VUD6 431 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 ANKRD20A3Q5VUR7 823 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 SNX20Q7Z614 316 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 KLHDC8BQ8IXV7 354 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 SYTL1Q8IYJ3 562 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 ACTL9Q8TC94 416 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 LCN9Q8WX39 176 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 CLIP3Q96DZ5 547 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 COPS8Q99627 209 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 NRTNQ99748 197 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 TFB2MQ9H5Q4 396 aaKnown RBP11.52□□□□□ -0.57
NLK-204ENST00000583517 COG4Q9H9E3 785 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 ARNT2Q9HBZ2 717 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 LRRC4CQ9HCJ2 640 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 CRLS1Q9UJA2 301 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 SNX7Q9UNH6 387 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 EFR3BQ9Y2G0 817 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 ZNF451Q9Y4E5 1061 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 MYO9AB2RTY4 2548 aa11.52□□□□□ -0.57
NLK-204ENST00000583517 MED13Q9UHV7 2174 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 ICE1Q9Y2F5 2266 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 TRBV5-4A0A0C4DH59 114 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 CCDC66A2RUB6 948 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 GSAPA4D1B5 854 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 CFAP99D6REC4 459 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 PJA2O43164 708 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 LDB2O43679 373 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 AGFG2O95081 481 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 ITGALP20701 1170 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 CYP2A7P20853 494 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 CTNNA1P35221 906 aaKnown RBP11.51□□□□□ -0.57
NLK-204ENST00000583517 PTPN7P35236 360 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 HADHAP40939 763 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 PREPP48147 710 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 CD151P48509 253 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 VAV2P52735 878 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 OTUD4Q01804 1114 aaKnown RBP11.51□□□□□ -0.57
NLK-204ENST00000583517 NCF4Q15080 339 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 GPR33Q49SQ1 333 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 FHL5Q5TD97 284 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 ZNF385CQ66K41 422 aaPredicted RBP11.51□□□□□ -0.57
NLK-204ENST00000583517 JMJD6Q6NYC1 403 aaPredicted RBP11.51□□□□□ -0.57
NLK-204ENST00000583517 HPS6Q86YV9 775 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 CDKL3Q8IVW4 592 aaPredicted RBP11.51□□□□□ -0.57
NLK-204ENST00000583517 ZBTB2Q8N680 514 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 TC2NQ8N9U0 490 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 Q8NA96 180 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 GLIS1Q8NBF1 620 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 FDCSPQ8NFU4 85 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 OR52E1Q8NGJ3 308 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 SPATA13Q96N96 652 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 TRAPPC9Q96Q05 1148 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 FERD3LQ96RJ6 166 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 DPH2Q9BQC3 489 aaPredicted RBP11.51□□□□□ -0.57
NLK-204ENST00000583517 FERMT1Q9BQL6 677 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 NUDT9Q9BW91 350 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 FAM96AQ9H5X1 160 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 MVB12BQ9H7P6 319 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 ACTR5Q9H9F9 607 aaPredicted RBP11.51□□□□□ -0.57
NLK-204ENST00000583517 TFR2Q9UP52 801 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 CSMD1Q96PZ7 3565 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 DOPEY1Q5JWR5 2465 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 PCSK5Q92824 1860 aa11.51□□□□□ -0.57
NLK-204ENST00000583517 SHANK1Q9Y566 2161 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 H3BMH7 237 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 H7C0S8 307 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 IFRD1O00458 451 aaPredicted RBP11.5□□□□□ -0.57
NLK-204ENST00000583517 CCL22O00626 93 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 KCNN4O15554 427 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 RBP3P10745 1247 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 PTMSP20962 102 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 ACRV1P26436 265 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 PDHA2P29803 388 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 MC4RP32245 332 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 LMAN1P49257 510 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 CDKN1CP49918 316 aaPredicted RBP11.5□□□□□ -0.57
NLK-204ENST00000583517 EIF3EP60228 445 aaKnown RBP11.5□□□□□ -0.57
NLK-204ENST00000583517 TMPRSS15P98073 1019 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 RPA4Q13156 261 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 BOP1Q14137 746 aaKnown RBP11.5□□□□□ -0.57
NLK-204ENST00000583517 PRPSAP1Q14558 356 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 INPP5JQ15735 1006 aaPredicted RBP11.5□□□□□ -0.57
NLK-204ENST00000583517 C4orf17Q53FE4 359 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 CCDC181Q5TID7 509 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 SARM1Q6SZW1 724 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 CDHR3Q6ZTQ4 885 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 MED25Q71SY5 747 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 AMIGO1Q86WK6 493 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 LURAP1LQ8IV03 231 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 ADGRF3Q8IZF5 1079 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 TMEM102Q8N9M5 508 aaPredicted RBP11.5□□□□□ -0.57
NLK-204ENST00000583517 CCDC110Q8TBZ0 833 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 PPP1R2P1Q96PQ5 205 aa11.5□□□□□ -0.57
NLK-204ENST00000583517 SMAD5Q99717 465 aaKnown RBP11.5□□□□□ -0.57
NLK-204ENST00000583517 TBL1YQ9BQ87 522 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms