RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 ELOCQ15369 112 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 SF3A2Q15428 464 aaKnown RBP9.32□□□□□ -0.92
RFFL-210ENST00000582308 SEPT7Q16181 437 aaKnown RBP9.32□□□□□ -0.92
RFFL-210ENST00000582308 AGAP9Q5VTM2 703 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 IL27RAQ6UWB1 636 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 ABRAXAS1Q6UWZ7 409 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 CDHR3Q6ZTQ4 885 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 NEK10Q6ZWH5 1172 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 TBC1D1Q86TI0 1168 aaPredicted RBP9.32□□□□□ -0.92
RFFL-210ENST00000582308 PDZD3Q86UT5 571 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 SFTPA2Q8IWL1 248 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 SDR16C5Q8N3Y7 309 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 FSTL5Q8N475 847 aaPredicted RBP9.32□□□□□ -0.92
RFFL-210ENST00000582308 BANPQ8N9N5 519 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 FAM46DQ8NEK8 389 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 ASB11Q8WXH4 323 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 PTERQ96BW5 349 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 CABS1Q96KC9 395 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 GTPBP2Q9BX10 602 aaKnown RBP9.32□□□□□ -0.92
RFFL-210ENST00000582308 STMN4Q9H169 189 aaPredicted RBP9.32□□□□□ -0.92
RFFL-210ENST00000582308 ACBD3Q9H3P7 528 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 GMEB2Q9UKD1 530 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 PCOLCE2Q9UKZ9 415 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 CSNK1G3Q9Y6M4 447 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 FAM186AA6NE01 2351 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 PCNX2A6NKB5 2137 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 TRBV23OR9-2A0A075B6M9 112 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 LNP1A1A4G5 178 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 NPEPPSL1A6NEC2 478 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 OR52A4PA6NMU1 304 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 PDZK1P1A8MUH7 402 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 GFYI3L273 518 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 SPAG7O75391 227 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 CER1O95813 267 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 SLC35G4P0C7Q5 338 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 F3P13726 295 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 TGM1P22735 817 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 EPHA8P29322 1005 aaPredicted RBP9.31□□□□□ -0.92
RFFL-210ENST00000582308 CRHR1P34998 444 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 GLRBP48167 497 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 KCNC1P48547 511 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 MAGOHP61326 146 aaKnown RBP9.31□□□□□ -0.92
RFFL-210ENST00000582308 SPEM2Q0P670 501 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 OR4D1Q15615 310 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 RPE65Q16518 533 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 FAM83EQ2M2I3 478 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 DEFB133Q30KQ1 61 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 UAP1L1Q3KQV9 507 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 C16orf46Q6P387 395 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 IYDQ6PHW0 289 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 LVRNQ6Q4G3 990 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 ISCA2Q86U28 154 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 GKN2Q86XP6 184 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 GATAD2AQ86YP4 633 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 MYO1HQ8N1T3 1032 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 MINDY1Q8N5J2 469 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 PHC3Q8NDX5 983 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 CFAP61Q8NHU2 1237 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 SAP25Q8TEE9 199 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 SKA2Q8WVK7 121 aaPredicted RBP9.31□□□□□ -0.92
RFFL-210ENST00000582308 PATE1Q8WXA2 126 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 TFGQ92734 400 aaPredicted RBP9.31□□□□□ -0.92
RFFL-210ENST00000582308 DLG3Q92796 817 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 ATP6V1G3Q96LB4 118 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 C12orf66Q96MD2 445 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 INSM2Q96T92 566 aaPredicted RBP9.31□□□□□ -0.92
RFFL-210ENST00000582308 PHOX2BQ99453 314 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 NMRAL1Q9HBL8 299 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 PARD6AQ9NPB6 346 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 SENP1Q9P0U3 644 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 ZNF624Q9P2J8 865 aaPredicted RBP9.31□□□□□ -0.92
RFFL-210ENST00000582308 NCDNQ9UBB6 729 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 DCDC2Q9UHG0 476 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 ADAMTS6Q9UKP5 1117 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 EMCNQ9ULC0 261 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 ACTL7BQ9Y614 415 aa9.31□□□□□ -0.92
RFFL-210ENST00000582308 CFAP20Q9Y6A4 193 aaKnown RBP9.31□□□□□ -0.92
RFFL-210ENST00000582308 HEATR5BQ9P2D3 2071 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 PRAMEF33A0A0G2JMD5 474 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 ARHGEF33A8MVX0 844 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 PROB1E7EW31 1015 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 BTN3A1O00481 513 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 COPEO14579 308 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 YKT6O15498 198 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 FFAR2O15552 330 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 TYROBPO43914 113 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 NOBOXO60393 691 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 LRP3O75074 770 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 PSIP1O75475 530 aaKnown RBP9.3□□□□□ -0.92
RFFL-210ENST00000582308 ANXA6P08133 673 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 GSTA1P08263 222 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 TFEBP19484 476 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 SLC19A1P41440 591 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 CCT8P50990 548 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 ATP6V0D1P61421 351 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 MPP2Q14168 576 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 TSNQ15631 228 aaKnown RBP9.3□□□□□ -0.92
RFFL-210ENST00000582308 CSRP2Q16527 193 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 N4BP2L1Q5TBK1 243 aaPredicted RBP9.3□□□□□ -0.92
RFFL-210ENST00000582308 LRRC8EQ6NSJ5 796 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms