RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 HDAC11Q96DB2 347 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 ABHD8Q96I13 439 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 CFAP57Q96MR6 1250 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 SLX1AQ9BQ83 275 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 NAA11Q9BSU3 229 aaPredicted RBP4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 ABHD6Q9BV23 337 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 FAM129AQ9BZQ8 928 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 PIH1D3Q9NQM4 214 aaKnown RBP4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 PTTG2Q9NZH5 202 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 IL17BQ9UHF5 180 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 SLC24A2Q9UI40 661 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 A0A0G2JNG1 304 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 TEX13DA0A0J9YY54 714 aaPredicted RBP4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 CTAGE9A4FU28 777 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 DVL1O14640 695 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 SYNCRIPO60506 623 aaKnown RBP4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 SOCS5O75159 536 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 CELF2O95319 508 aaKnown RBP4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 LDLRP01130 860 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 FYNP06241 537 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 CCDC175P0C221 793 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 OR2T7P0C7T2 308 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 CTAGE8P0CG41 777 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 CSF2RAP15509 400 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 ERCC2P18074 760 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 CBLP22681 906 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 MCCP23508 829 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 ZNF41P51814 821 aaPredicted RBP4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 ZNF75DP51815 510 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 TERF1P54274 439 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 TPD52P55327 224 aaPredicted RBP4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 ERVFC1-1P60608 527 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 HNRNPKP61978 463 aaKnown RBP eCLIP4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 RPL24P83731 157 aaKnown RBP4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 COG2Q14746 738 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 KIR2DS5Q14953 304 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 TNIP1Q15025 636 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 DUOXA1Q1HG43 343 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 KLHL26Q53HC5 615 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 GSG1LQ6UXU4 331 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 KCTD8Q6ZWB6 473 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 LONP2Q86WA8 852 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 CTAGE4Q8IX94 777 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 CEP57L1Q8IYX8 460 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 TTC30BQ8N4P2 665 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 PI4KAP1Q8N8J0 262 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 MOSPD2Q8NHP6 518 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 SPDL1Q96EA4 605 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 FER1L6-AS2Q96M78 137 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 INPP4AQ96PE3 977 aaPredicted RBP4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 NUP85Q9BW27 656 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 WNT5BQ9H1J7 359 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 EVA1AQ9H8M9 152 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 FKRPQ9H9S5 495 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 TUBE1Q9UJT0 475 aa4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 SPIN1Q9Y657 262 aaPredicted RBP4.44□□□□□ -1.7
SMCHD1-205ENST00000581383 FEZF1A0PJY2 475 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 SMTNL1A8MU46 457 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 H1F0P07305 194 aaKnown RBP4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 SNRNP70P08621 437 aaKnown RBP4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 OR52Z1P0C646 297 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 DANCRP0C864 163 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 ACP2P11117 423 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 CKMT2P17540 419 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 PCGF2P35227 344 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 PNRC1Q12796 327 aaPredicted RBP4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 VWC2Q2TAL6 325 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 KRT39Q6A163 491 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 PACS1Q6VY07 963 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 ZBTB49Q6ZSB9 765 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 TMPRSS11FQ6ZWK6 438 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 CCDC186Q7Z3E2 898 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 CRYBG2Q8N1P7 616 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 L3MBTL4Q8NA19 623 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 POC1AQ8NBT0 407 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 SIPA1Q96FS4 1042 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 SFXN2Q96NB2 322 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 LRRC1Q9BTT6 524 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 LMF2Q9BU23 707 aaKnown RBP4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 TCF7L2Q9NQB0 619 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 ABCF3Q9NUQ8 709 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 SLC38A7Q9NVC3 462 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 DPP3Q9NY33 737 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 ANAPC5Q9UJX4 755 aa4.43□□□□□ -1.7
SMCHD1-205ENST00000581383 MED19A0JLT2 244 aaPredicted RBP4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 TRIM77I1YAP6 450 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 SYNGR3O43761 229 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 ZNF23P17027 643 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 ACHEP22303 614 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 MTHFRP42898 656 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 CCR10P46092 362 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 SLC9A3P48764 834 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 FMO5P49326 533 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 MBTD1Q05BQ5 628 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 PTPRCAPQ14761 206 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 ASPRV1Q53RT3 343 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 SIRPB2Q5JXA9 342 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 PDSS1Q5T2R2 415 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 GRTP1Q5TC63 336 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 FAM198BQ6UWH4 519 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms