RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 KIR3DX1Q9H7L2 352 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 MRM3Q9HC36 420 aaKnown RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 PDE7BQ9NP56 450 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 FBXO8Q9NRD0 319 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 C20orf96Q9NUD7 363 aaPredicted RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 SOHLH2Q9NX45 425 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 MARCH4Q9P2E8 410 aaPredicted RBP6.39□□□□□ -1.39
TRAF4-213ENST00000578917 PDP2Q9P2J9 529 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 POLG2Q9UHN1 485 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 SLC24A2Q9UI40 661 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 GNPTGQ9UJJ9 305 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 SOX13Q9UN79 622 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 VPS9D1Q9Y2B5 631 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 CRYL1Q9Y2S2 319 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 PRSS21Q9Y6M0 314 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 RP1P56715 2156 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 PIEZO2Q9H5I5 2752 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 BPTFQ12830 3046 aa6.39□□□□□ -1.39
TRAF4-213ENST00000578917 CACNA1GO43497 2377 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 FAM237BA0A1B0GVD1 139 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 OR5K3A6NET4 321 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 IQCF5A8MTL0 148 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 B4E171 279 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 C9orf172C9J069 976 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 H3BMM5 538 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 CCDC188H7C350 402 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 MATN2O00339 956 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 C9P02748 559 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 CCNYL3P0C7X3 344 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 LIPCP11150 499 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 PSMA3P25788 255 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 CD82P27701 267 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 CCR7P32248 378 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 TSPAN7P41732 249 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 MAGEA6P43360 314 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 HSD11B2P80365 405 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 PTK6Q13882 451 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 SEMA3AQ14563 771 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 IL11RAQ14626 422 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 TGIF1Q15583 401 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 LONRF1Q17RB8 773 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 BBS9Q3SYG4 887 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 HP1BP3Q5SSJ5 553 aaPredicted RBP6.38□□□□□ -1.39
TRAF4-213ENST00000578917 IZUMO3Q5VZ72 239 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 ARMC3Q5W041 872 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 ANKS6Q68DC2 871 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 ZNF470Q6ECI4 717 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 SYT10Q6XYQ8 523 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 GPR155Q7Z3F1 870 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 MAATS1Q7Z4T9 603 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 CREG2Q8IUH2 290 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 TBC1D21Q8IYX1 336 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 KRT222Q8N1A0 295 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 C17orf53Q8N3J3 647 aaPredicted RBP6.38□□□□□ -1.39
TRAF4-213ENST00000578917 RAB42Q8N4Z0 105 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.38□□□□□ -1.39
TRAF4-213ENST00000578917 OR5AR1Q8NGP9 310 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 CALML6Q8TD86 181 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 UBXN4Q92575 508 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 ZNF592Q92610 1267 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 KIAA1143Q96AT1 154 aaPredicted RBP6.38□□□□□ -1.39
TRAF4-213ENST00000578917 ZNF669Q96BR6 464 aaPredicted RBP6.38□□□□□ -1.39
TRAF4-213ENST00000578917 FAM136AQ96C01 138 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 TRIM44Q96DX7 344 aaPredicted RBP6.38□□□□□ -1.39
TRAF4-213ENST00000578917 SERPINB12Q96P63 405 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 CD180Q99467 661 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 MAP3K3Q99759 626 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 DDA1Q9BW61 102 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 CARD6Q9BX69 1037 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 ULBP3Q9BZM4 244 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 B3GNT4Q9C0J1 378 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 OR52A5Q9H2C5 316 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 CPNE5Q9HCH3 593 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 TREX1Q9NSU2 369 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 OGFRQ9NZT2 677 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 FOXJ2Q9P0K8 574 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 EPHA6Q9UF33 1036 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 PCYOX1Q9UHG3 505 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 TSR3Q9UJK0 312 aaKnown RBP6.38□□□□□ -1.39
TRAF4-213ENST00000578917 RALYQ9UKM9 306 aaKnown RBP6.38□□□□□ -1.39
TRAF4-213ENST00000578917 SLC39A10Q9ULF5 831 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 B3GALT1Q9Y5Z6 326 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 LRRK1Q38SD2 2015 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 UNC13CQ8NB66 2214 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 AHCTF1Q8WYP5 2266 aa6.38□□□□□ -1.39
TRAF4-213ENST00000578917 TP53BP1Q12888 1972 aaPredicted RBP6.37□□□□□ -1.39
TRAF4-213ENST00000578917 MN1Q10571 1320 aaPredicted RBP6.37□□□□□ -1.39
TRAF4-213ENST00000578917 IGHV5-51A0A0C4DH38 117 aa6.37□□□□□ -1.39
TRAF4-213ENST00000578917 SLC5A10A0PJK1 596 aa6.37□□□□□ -1.39
TRAF4-213ENST00000578917 PIPSLA2A3N6 862 aa6.37□□□□□ -1.39
TRAF4-213ENST00000578917 SLC9B1P1A6NJY1 282 aa6.37□□□□□ -1.39
TRAF4-213ENST00000578917 EFCAB8A8MWE9 144 aa6.37□□□□□ -1.39
TRAF4-213ENST00000578917 C2orf74A8MZ97 194 aa6.37□□□□□ -1.39
TRAF4-213ENST00000578917 ISM1B1AKI9 464 aa6.37□□□□□ -1.39
TRAF4-213ENST00000578917 BHMG1C9JSJ3 638 aaPredicted RBP6.37□□□□□ -1.39
TRAF4-213ENST00000578917 DNALI1O14645 258 aaPredicted RBP6.37□□□□□ -1.39
TRAF4-213ENST00000578917 NDC80O14777 642 aa6.37□□□□□ -1.39
TRAF4-213ENST00000578917 TTI1O43156 1089 aa6.37□□□□□ -1.39
TRAF4-213ENST00000578917 TMEM63AO94886 807 aa6.37□□□□□ -1.39
TRAF4-213ENST00000578917 ZBTB11O95625 1053 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms