RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 TCEAL1Q15170 157 aa13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 TAZQ16635 292 aa13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 GPR33Q49SQ1 333 aa13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 SLC6A19Q695T7 634 aa13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 CDKL3Q8IVW4 592 aaPredicted RBP13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 FDCSPQ8NFU4 85 aa13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 TFB2MQ9H5Q4 396 aaKnown RBP13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 NHEJ1Q9H9Q4 299 aaPredicted RBP13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 ABHD10Q9NUJ1 306 aa13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 SPTLC3Q9NUV7 552 aa13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 PCMTD2Q9NV79 361 aa13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 SAE1Q9UBE0 346 aaPredicted RBP13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 NDOR1Q9UHB4 597 aa13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 ARL5AQ9Y689 179 aa13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 USP9YO00507 2555 aaPredicted RBP13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 BSNQ9UPA5 3926 aa13.8□□□□□ -0.2
SMARCD2-205ENST00000577686 A6NL46 340 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 F8W8V4 182 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 QSOX1O00391 747 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 GAPDHSO14556 408 aaPredicted RBP13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 ATP1B2P14415 290 aaPredicted RBP13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 PTMSP20962 102 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 PRDX3P30048 256 aaKnown RBP13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 CETN2P41208 172 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 FOLR3P41439 243 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 ABRQ12979 859 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 FAM198BQ6UWH4 519 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 SNX20Q7Z614 316 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 AMIGO1Q86WK6 493 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 CNGA4Q8IV77 575 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 KATNAL2Q8IYT4 538 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 NXPE1Q8N323 547 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 OR1L3Q8NH93 324 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 PRR7Q8TB68 274 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 SMAD5Q99717 465 aaKnown RBP13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 NUDT9Q9BW91 350 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 MFRPQ9BY79 579 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 PITPNM3Q9BZ71 974 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 ILKAPQ9H0C8 392 aaPredicted RBP13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 TXLNGQ9NUQ3 528 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 FKBPLQ9UIM3 349 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 SRPK3Q9UPE1 567 aa13.79□□□□□ -0.2
SMARCD2-205ENST00000577686 hCG_1818297A0A087WSY0 165 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 MACROD2A1Z1Q3 448 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 CCDC66A2RUB6 948 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 APOC4-APOC2K7ER74 178 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 AGTP01019 485 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 APOC2P02655 101 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 OTX2P32243 289 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 SHMT2P34897 504 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 HADHBP55084 474 aaKnown RBP13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 COPS2P61201 443 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 ATP1A4Q13733 1029 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 IRAK1BP1Q5VVH5 260 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 MAMDC2Q7Z304 686 aaPredicted RBP13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 DAAM2Q86T65 1068 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 SLC38A9Q8NBW4 561 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 PROKR1Q8TCW9 393 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 DENND1AQ8TEH3 1009 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 TCTN2Q96GX1 697 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 VPS50Q96JG6 964 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 ALS2CR12Q96Q35 445 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 COG4Q9H9E3 785 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 IRAK4Q9NWZ3 460 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 HYOU1Q9Y4L1 999 aa13.78□□□□□ -0.2
SMARCD2-205ENST00000577686 TCP11X1B4DZS4 312 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 ZNF749O43361 778 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 MFAP3LO75121 409 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 SEMA7AO75326 666 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 OR2B3O76000 313 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 ST6GAL1P15907 406 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 LMAN1P49257 510 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 PLOD1Q02809 727 aaPredicted RBP13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 SSPNQ14714 243 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 PTCHD3Q3KNS1 767 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 ZRANB3Q5FWF4 1079 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 FAM182AQ5T1J6 154 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 FBXO38Q6PIJ6 1188 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 BBS12Q6ZW61 710 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 MRGPREQ86SM8 312 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 ZADH2Q8N4Q0 377 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 ZBTB2Q8N680 514 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 C19orf47Q8N9M1 422 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 OR52E1Q8NGJ3 308 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 COG1Q8WTW3 980 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 CALR3Q96L12 384 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 C5orf34Q96MH7 638 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 TRAPPC9Q96Q05 1148 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 AP1M1Q9BXS5 423 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 AGPAT4Q9NRZ5 378 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 ZDHHC3Q9NYG2 299 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 ACTR10Q9NZ32 417 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 LUZP4Q9P127 313 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 IFT80Q9P2H3 777 aaPredicted RBP13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 POLG2Q9UHN1 485 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 SLC5A6Q9Y289 635 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 B3GNT3Q9Y2A9 372 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 ALG6Q9Y672 507 aa13.77□□□□□ -0.21
SMARCD2-205ENST00000577686 COL12A1Q99715 3063 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms