RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 OR52A4PA6NMU1 304 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 IQCF5A8MTL0 148 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 EFCAB8A8MWE9 144 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 KMOO15229 486 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 SNX2O60749 519 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 RFPL3O75679 317 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 POP7O75817 140 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 ALX3O95076 343 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 PF4P02776 101 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 MSH3P20585 1137 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 RPL10P27635 214 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 PDX1P52945 283 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 CLCA4Q14CN2 919 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 INSCQ1MX18 579 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 ANKRD20A4Q4UJ75 823 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 BCL7AQ4VC05 210 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 C14orf28Q4W4Y0 310 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 UBAP2Q5T6F2 1119 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 DUS1LQ6P1R4 473 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 AFTPHQ6ULP2 937 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 SYDE1Q6ZW31 735 aaPredicted RBP9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 TMEM135Q86UB9 458 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 ARL14Q8N4G2 192 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 ADAMTS14Q8WXS8 1223 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 ZNF669Q96BR6 464 aaPredicted RBP9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 WDR89Q96FK6 387 aaPredicted RBP9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 SNF8Q96H20 258 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 COPS8Q99627 209 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 CCDC3Q9BQI4 270 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 ERP44Q9BS26 406 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 TIMM29Q9BSF4 260 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 DUSP23Q9BVJ7 150 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 OSGEPL1Q9H4B0 414 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 AKTIPQ9H8T0 292 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 MRM3Q9HC36 420 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 XAB2Q9HCS7 855 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 BFARQ9NZS9 450 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 ZNF624Q9P2J8 865 aaPredicted RBP9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 PADI4Q9UM07 663 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 PSMD13Q9UNM6 376 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 PCDHGB7Q9Y5F8 929 aa9.28□□□□□ -0.92
NPLOC4-219ENST00000576713 FAM237BA0A1B0GVD1 139 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 A0A1W2PNU3 283 aaPredicted RBP9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 A0A1W2PQM1 296 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 SDR42E2A6NKP2 422 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 GPR89AB7ZAQ6 455 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 CD3EAPO15446 510 aaKnown RBP9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 B4GAT1O43505 415 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 OPA1O60313 960 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 GPR89BP0CG08 455 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 ATP1B2P14415 290 aaPredicted RBP9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 PDHA2P29803 388 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 ELK3P41970 407 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 PRLHRP49683 370 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 CLCNKAP51800 687 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 UBE2IP63279 158 aaKnown RBP9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 PRAMEP78395 509 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 CFHR1Q03591 330 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 DMPKQ09013 629 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 LRP8Q14114 963 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 CRYMQ14894 314 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 MORF4L2Q15014 288 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 WHAMMP3Q1A5X7 153 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 BBS9Q3SYG4 887 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 CTSL3PQ5NE16 218 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 KIAA0930Q6ICG6 404 aaPredicted RBP9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 CASC4Q6P4E1 433 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 TRMT10BQ6PF06 316 aaKnown RBP9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 IYDQ6PHW0 289 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 CENPUQ71F23 418 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 NLRP9Q7RTR0 991 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 HOOK3Q86VS8 718 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 DENND6AQ8IWF6 608 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 TRIM42Q8IWZ5 723 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 SDR16C5Q8N3Y7 309 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 SFRP1Q8N474 314 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 Q8N9G6 341 aaPredicted RBP9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 GPR150Q8NGU9 434 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 WFDC12Q8WWY7 111 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 JPH3Q8WXH2 748 aaPredicted RBP9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 PEX13Q92968 403 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 GAL3ST3Q96A11 431 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 ULK4Q96C45 1275 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 SGSM3Q96HU1 749 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 RUNDC3BQ96NL0 473 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 SCNM1Q9BWG6 230 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 P2RY12Q9H244 342 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 CATSPERZQ9NTU4 200 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 LRIT1Q9P2V4 623 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 GALPQ9UBC7 116 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 ANAPC5Q9UJX4 755 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 MAD1L1Q9Y6D9 718 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 TEX264Q9Y6I9 313 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 RPS6KL1Q9Y6S9 549 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 NBEAQ8NFP9 2946 aa9.27□□□□□ -0.93
NPLOC4-219ENST00000576713 FAM221BA6H8Z2 402 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 E7ESA3 106 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 PIAS1O75925 651 aa9.26□□□□□ -0.93
NPLOC4-219ENST00000576713 F3P13726 295 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms