RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 DRG2P55039 364 aaKnown RBP7.29□□□□□ -1.24
NUP88-205ENST00000572809 UBE2IP63279 158 aaKnown RBP7.29□□□□□ -1.24
NUP88-205ENST00000572809 TMPRSS15P98073 1019 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 XIAPP98170 497 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 CLCA4Q14CN2 919 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 TGIF1Q15583 401 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 SEPT7Q16181 437 aaKnown RBP7.29□□□□□ -1.24
NUP88-205ENST00000572809 LONRF2Q1L5Z9 754 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 SEL1L2Q5TEA6 688 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 AGAP9Q5VTM2 703 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 KCTD11Q693B1 232 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 INO80CQ6PI98 192 aaPredicted RBP7.29□□□□□ -1.24
NUP88-205ENST00000572809 TMEM26Q6ZUK4 368 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 ARHGAP22Q7Z5H3 698 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 ZFAND4Q86XD8 727 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 PLXDC1Q8IUK5 500 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 LRRC8AQ8IWT6 810 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 TRIM48Q8IWZ4 208 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 TRIM42Q8IWZ5 723 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 KLHDC8BQ8IXV7 354 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 IL22RA1Q8N6P7 574 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 CCDC112Q8NEF3 446 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 OR13C4Q8NGS5 318 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 NKD1Q969G9 470 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 CXorf40BQ96DE9 158 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 SGF29Q96ES7 293 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 ZNF514Q96K75 400 aaPredicted RBP7.29□□□□□ -1.24
NUP88-205ENST00000572809 BBC3Q96PG8 261 aaPredicted RBP7.29□□□□□ -1.24
NUP88-205ENST00000572809 CCNL2Q96S94 520 aaPredicted RBP7.29□□□□□ -1.24
NUP88-205ENST00000572809 C19orf43Q9BQ61 176 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 FRMD8P1Q9BZ68 369 aaPredicted RBP7.29□□□□□ -1.24
NUP88-205ENST00000572809 ASPSCR1Q9BZE9 553 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 LRRC40Q9H9A6 602 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 UCK1Q9HA47 277 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 SLC40A1Q9NP59 571 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 SMOXQ9NWM0 555 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 OCIAD1Q9NX40 245 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 SLC39A1Q9NY26 324 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 FOXJ2Q9P0K8 574 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 WDR37Q9Y2I8 494 aa7.29□□□□□ -1.24
NUP88-205ENST00000572809 R3HDM2Q9Y2K5 976 aaKnown RBP7.29□□□□□ -1.24
NUP88-205ENST00000572809 ITPR1Q14643 2758 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 ZFC3H1O60293 1989 aaKnown RBP7.28□□□□□ -1.24
NUP88-205ENST00000572809 CELSR3Q9NYQ7 3312 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 LILRA5A6NI73 299 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 OR52A4PA6NMU1 304 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 EFCAB7A8K855 629 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 AGAP14A8MT82 685 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 B4E171 279 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 PAX4O43316 350 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 LDB2O43679 373 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 UBXN7O94888 489 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 AP2A1O95782 977 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 CCDC175P0C221 793 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 LIPCP11150 499 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 RALBP11234 206 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 TYRP1P17643 537 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 AKT1P31749 480 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 TSPAN7P41732 249 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 RHDQ02161 417 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 DMPKQ09013 629 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 RPS6KA1Q15418 735 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 P3H1Q32P28 736 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 FNBP1LQ5T0N5 605 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 DCAF12Q5T6F0 453 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 METRNLQ641Q3 311 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 ZNF662Q6ZS27 426 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 DET1Q7L5Y6 550 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 SNX20Q7Z614 316 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 LINC00523Q86TU6 105 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 FAM129CQ86XR2 697 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 DTX1Q86Y01 620 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 SLC13A5Q86YT5 568 aaPredicted RBP7.28□□□□□ -1.24
NUP88-205ENST00000572809 SULF2Q8IWU5 870 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 RBM12BQ8IXT5 1001 aaKnown RBP7.28□□□□□ -1.24
NUP88-205ENST00000572809 TAB3Q8N5C8 712 aaPredicted RBP7.28□□□□□ -1.24
NUP88-205ENST00000572809 LSM14AQ8ND56 463 aaKnown RBP7.28□□□□□ -1.24
NUP88-205ENST00000572809 HEXDCQ8WVB3 486 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 SNRNP27Q8WVK2 155 aaKnown RBP7.28□□□□□ -1.24
NUP88-205ENST00000572809 C1orf54Q8WWF1 131 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 ATG4AQ8WYN0 398 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 ART4Q93070 314 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 ULK4Q96C45 1275 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 DCUN1D1Q96GG9 259 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 CDKN2AIPNLQ96HQ2 116 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 FAM96AQ9H5X1 160 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 LZTFL1Q9NQ48 299 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 FBXO8Q9NRD0 319 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 POT1Q9NUX5 634 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 OGFRQ9NZT2 677 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 KLHL3Q9UH77 587 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 CRLS1Q9UJA2 301 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 ACSL5Q9ULC5 683 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 PSMD13Q9UNM6 376 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 ZNF148Q9UQR1 794 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 PCDHGA3Q9Y5H0 932 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 B3GALT1Q9Y5Z6 326 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 SLC30A1Q9Y6M5 507 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 ZFYVE26Q68DK2 2539 aa7.28□□□□□ -1.24
NUP88-205ENST00000572809 KLHL33A6NCF5 533 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms