RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 ZDHHC3Q9NYG2 299 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 APOBEC3BQ9UH17 382 aaKnown RBP13.5□□□□□ -0.25
RPAIN-209ENST00000571558 CRLS1Q9UJA2 301 aa13.5□□□□□ -0.25
RPAIN-209ENST00000571558 TLDC2A0PJX2 215 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 PMS2P1A4D2B8 440 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 NDUFS3O75489 264 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 PCCBP05166 539 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 PYGLP06737 847 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 FAM87AP0C7U9 286 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 CNTFP26441 200 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 SPRP35270 261 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-209ENST00000571558 GPR1P46091 355 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 YPEL5P62699 121 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 TLE1Q04724 770 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 PRRT3Q5FWE3 981 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 RAET1GQ6H3X3 334 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 CROCCP2Q86T23 111 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 FUBP1Q96AE4 644 aaKnown RBP13.49□□□□□ -0.25
RPAIN-209ENST00000571558 PGM2Q96G03 612 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 VPS39Q96JC1 886 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 COPS8Q99627 209 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 GPR22Q99680 433 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 TEX101Q9BY14 249 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 SLC13A1Q9BZW2 595 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 B3GNT4Q9C0J1 378 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 TXNDC16Q9P2K2 825 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 VPS9D1Q9Y2B5 631 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 MTO1Q9Y2Z2 717 aaKnown RBP13.49□□□□□ -0.25
RPAIN-209ENST00000571558 PCDHB11Q9Y5F2 797 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 IKBKGQ9Y6K9 419 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 DOPEY2Q9Y3R5 2298 aa13.49□□□□□ -0.25
RPAIN-209ENST00000571558 USP9XQ93008 2570 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-209ENST00000571558 SGTAO43765 313 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 RPS3P23396 243 aaKnown RBP eCLIP13.48□□□□□ -0.25
RPAIN-209ENST00000571558 CD82P27701 267 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 BLKP51451 505 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 THOP1P52888 689 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 TIAL1Q01085 375 aaKnown RBP eCLIP13.48□□□□□ -0.252e-6■■■■□ 23
RPAIN-209ENST00000571558 ILF2Q12905 390 aaKnown RBP13.48□□□□□ -0.25
RPAIN-209ENST00000571558 EIF2B5Q13144 721 aaKnown RBP13.48□□□□□ -0.25
RPAIN-209ENST00000571558 BMPR2Q13873 1038 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 INPP5AQ14642 412 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 TBR1Q16650 682 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 CTSL3PQ5NE16 218 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 MANEAQ5SRI9 462 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 LDLRAP1Q5SW96 308 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 HEATR4Q86WZ0 1026 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 PHYKPLQ8IUZ5 450 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 RBFAQ8N0V3 343 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 FSTL5Q8N475 847 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-209ENST00000571558 ISL2Q96A47 359 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 GFM1Q96RP9 751 aaKnown RBP13.48□□□□□ -0.25
RPAIN-209ENST00000571558 RUFY1Q96T51 708 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 TTC1Q99614 292 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 CAAP1Q9H8G2 361 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 TMBIM4Q9HC24 238 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 TBK1Q9UHD2 729 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 CORO1CQ9ULV4 474 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-209ENST00000571558 CRYL1Q9Y2S2 319 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 MED16Q9Y2X0 877 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 PCDHGA4Q9Y5G9 962 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 OAS3Q9Y6K5 1087 aaKnown RBP13.48□□□□□ -0.25
RPAIN-209ENST00000571558 MYO9AB2RTY4 2548 aa13.48□□□□□ -0.25
RPAIN-209ENST00000571558 USP9YO00507 2555 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-209ENST00000571558 D6RAR5 112 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 PRMT5O14744 637 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-209ENST00000571558 PFDN6O15212 129 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 INPP4BO15327 924 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 YY2O15391 372 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 KRT38O76015 456 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 SYF2O95926 243 aaKnown RBP13.47□□□□□ -0.25
RPAIN-209ENST00000571558 SNRPAP09012 282 aaKnown RBP13.47□□□□□ -0.25
RPAIN-209ENST00000571558 JMJD7P0C870 316 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 ZNF7P17097 686 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-209ENST00000571558 PPARGP37231 505 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-209ENST00000571558 CDK3Q00526 305 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 NFKB2Q00653 900 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 TMED2Q15363 201 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 TGIF1Q15583 401 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 RBM20Q5T481 1227 aaKnown RBP13.47□□□□□ -0.25
RPAIN-209ENST00000571558 MROH9Q5TGP6 573 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 CNPY4Q8N129 248 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 CLDN19Q8N6F1 224 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 ARL10Q8N8L6 244 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 MTBPQ96DY7 904 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 AARSD1Q9BTE6 412 aaKnown RBP13.47□□□□□ -0.25
RPAIN-209ENST00000571558 LGR4Q9BXB1 951 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 ACBD3Q9H3P7 528 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 WDR70Q9NW82 654 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 TUBD1Q9UJT1 453 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 PRSS21Q9Y6M0 314 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 UBA6A0AVT1 1052 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-209ENST00000571558 CLEC18AA5D8T8 446 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 FOXO6A8MYZ6 492 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 TRIM49D1C9J1S8 452 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 MTX2O75431 263 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 RFPL1O75677 317 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 SLC25A14O95258 325 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-209ENST00000571558 ESR1P03372 595 aa13.47□□□□□ -0.25
RPAIN-209ENST00000571558 ALDOAP04075 364 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms