RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 TRAV17A0A0B4J275 112 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 AGPSO00116 658 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 HTRA2O43464 458 aaPredicted RBP6.69□□□□□ -1.34
CHD3-213ENST00000571249 NRDCO43847 1150 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 CNOT3O75175 753 aaKnown RBP6.69□□□□□ -1.34
CHD3-213ENST00000571249 FBXO24O75426 580 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 HEXIM1O94992 359 aaKnown RBP6.69□□□□□ -1.34
CHD3-213ENST00000571249 RASAL1O95294 804 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 TUBB4AP04350 444 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 IMPDH2P12268 514 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 PVRP15151 417 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 RHOQP17081 205 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 AGXTP21549 392 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 TNFAIP3P21580 790 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 MAPKAPK2P49137 400 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 TNFSF10P50591 281 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 STX17P56962 302 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 LRRC63Q05C16 580 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 MFAP5Q13361 173 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 PDCLQ13371 301 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 GPR18Q14330 331 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 KRT31Q15323 416 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 FILIP1LQ4L180 1135 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 TCP11X2Q5H9J9 407 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 TMTC4Q5T4D3 741 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 KLHL10Q6JEL2 608 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 RFLNAQ6ZTI6 216 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 FAM183BPQ6ZVS7 135 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 NLRP14Q86W24 1093 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 TMEM139Q8IV31 216 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 CHERPQ8IWX8 916 aaKnown RBP6.69□□□□□ -1.34
CHD3-213ENST00000571249 PPM1NQ8N819 430 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 TC2NQ8N9U0 490 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 ANKRD20A12PQ8NF67 263 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 KAT5Q92993 513 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 PTERQ96BW5 349 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 ECHDC3Q96DC8 303 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 MFSD3Q96ES6 412 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 LMF1Q96S06 567 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 SECISBP2Q96T21 854 aaKnown RBP6.69□□□□□ -1.34
CHD3-213ENST00000571249 SLC7A5P2Q9GIP4 190 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 LHPPQ9H008 270 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 ATP13A3Q9H7F0 1226 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 PLEKHF2Q9H8W4 249 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 TMEM248Q9NWD8 314 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 CRIM1Q9NZV1 1036 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 PFDN2Q9UHV9 154 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 GPN3Q9UHW5 284 aaPredicted RBP6.69□□□□□ -1.34
CHD3-213ENST00000571249 CD84Q9UIB8 345 aa6.69□□□□□ -1.34
CHD3-213ENST00000571249 UBA6A0AVT1 1052 aaPredicted RBP6.68□□□□□ -1.34
CHD3-213ENST00000571249 CCDC66A2RUB6 948 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 A6NNC1 897 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 FAM227AF5H4B4 570 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 PMPCBO75439 489 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 ATP1A1P05023 1023 aaKnown RBP6.68□□□□□ -1.34
CHD3-213ENST00000571249 UMODP07911 640 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 CYP2A7P20853 494 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 CFPP27918 469 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 VIPR1P32241 457 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 SOX5P35711 763 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 GNALP38405 381 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 RGRP47804 291 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 PMS1P54277 932 aaKnown RBP6.68□□□□□ -1.34
CHD3-213ENST00000571249 RPS26P62854 115 aaKnown RBP6.68□□□□□ -1.34
CHD3-213ENST00000571249 DPTQ07507 201 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 BCL2L1Q07817 233 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 OLIG2Q13516 323 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 TRIM14Q14142 442 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 SEPT7Q16181 437 aaKnown RBP6.68□□□□□ -1.34
CHD3-213ENST00000571249 ZCWPW2Q504Y3 356 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 DNTTIP2Q5QJE6 756 aaKnown RBP6.68□□□□□ -1.34
CHD3-213ENST00000571249 FBXO38Q6PIJ6 1188 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 OLFML1Q6UWY5 402 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 THSD4Q6ZMP0 1018 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 B4GALNT4Q76KP1 1039 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 BTLAQ7Z6A9 289 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 YTHDF3Q7Z739 585 aaKnown RBP6.68□□□□□ -1.34
CHD3-213ENST00000571249 SRLQ86TD4 932 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 PHYKPLQ8IUZ5 450 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 MAPK1IP1LQ8NDC0 245 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 OR2Y1Q8NGV0 311 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 OR1L3Q8NH93 324 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 ROBO4Q8WZ75 1007 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 HDAC10Q969S8 669 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 ZNF669Q96BR6 464 aaPredicted RBP6.68□□□□□ -1.34
CHD3-213ENST00000571249 AP2M1Q96CW1 435 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 THOC3Q96J01 351 aaKnown RBP6.68□□□□□ -1.34
CHD3-213ENST00000571249 HSH2DQ96JZ2 352 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 PANX2Q96RD6 677 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 CPXM1Q96SM3 734 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 TBCBQ99426 244 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 AGAP2Q99490 1192 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 DPH2Q9BQC3 489 aaPredicted RBP6.68□□□□□ -1.34
CHD3-213ENST00000571249 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.68□□□□□ -1.34
CHD3-213ENST00000571249 ABCG8Q9H221 673 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 OSGEPL1Q9H4B0 414 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 SLC40A1Q9NP59 571 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 KLC4Q9NSK0 619 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 POT1Q9NUX5 634 aa6.68□□□□□ -1.34
CHD3-213ENST00000571249 BEX4Q9NWD9 120 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms