RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 ASPMQ8IZT6 3477 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 A0A1W2PQF6 199 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 KRTAP29-1A8MX34 341 aaPredicted RBP4.88□□□□□ -1.63
KARSP3-201ENST00000571212 TMCO5BA8MYB1 307 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 AKR1B15C9JRZ8 316 aaPredicted RBP4.88□□□□□ -1.63
KARSP3-201ENST00000571212 CLDN5O00501 218 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 COCHO43405 550 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 MED7O43513 233 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 SERPING1P05155 500 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 CCDC130P13994 396 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 GNSP15586 552 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 MMP8P22894 467 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 YWHAQP27348 245 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 PPIFP30405 207 aaKnown RBP4.88□□□□□ -1.63
KARSP3-201ENST00000571212 TUBP50607 506 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 BCAT1P54687 386 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 BST2Q10589 180 aaKnown RBP4.88□□□□□ -1.63
KARSP3-201ENST00000571212 E2F2Q14209 437 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 GRM3Q14832 879 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 CRYMQ14894 314 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 RBBP5Q15291 538 aaKnown RBP4.88□□□□□ -1.63
KARSP3-201ENST00000571212 TBC1D25Q3MII6 688 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 MDH1BQ5I0G3 518 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 C10orf76Q5T2E6 689 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 HECTD3Q5T447 861 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 SYCP2LQ5T4T6 812 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 PMF1Q6P1K2 205 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 C19orf48Q6RUI8 117 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 CCNI2Q6ZMN8 369 aaPredicted RBP4.88□□□□□ -1.63
KARSP3-201ENST00000571212 TRIM72Q6ZMU5 477 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 OVCH2Q7RTZ1 564 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 GLRX5Q86SX6 157 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 PIGZQ86VD9 579 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 TMEM25Q86YD3 366 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 PHF13Q86YI8 300 aaPredicted RBP4.88□□□□□ -1.63
KARSP3-201ENST00000571212 NUP93Q8N1F7 819 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 DEFB119Q8N690 84 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 NT5C3BQ969T7 300 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 VCPIP1Q96JH7 1222 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 C5orf34Q96MH7 638 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 SPAG5Q96R06 1193 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 KCNK16Q96T55 309 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 GABRG3Q99928 467 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 FSD1LQ9BXM9 530 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 HAUS4Q9H6D7 363 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 DMAP1Q9NPF5 467 aaPredicted RBP4.88□□□□□ -1.63
KARSP3-201ENST00000571212 ZDHHC4Q9NPG8 344 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 NRIP3Q9NQ35 241 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 SPHK2Q9NRA0 654 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 ARGLU1Q9NWB6 273 aaPredicted RBP4.88□□□□□ -1.63
KARSP3-201ENST00000571212 CPSF2Q9P2I0 782 aaKnown RBP4.88□□□□□ -1.63
KARSP3-201ENST00000571212 BLOC1S6Q9UL45 172 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 PYCARDQ9ULZ3 195 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 SCML2Q9UQR0 700 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 ITPR1Q14643 2758 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 NUMA1Q14980 2115 aa4.88□□□□□ -1.63
KARSP3-201ENST00000571212 PES1O00541 588 aaKnown RBP4.87□□□□□ -1.63
KARSP3-201ENST00000571212 CACNG3O60359 315 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 CBFA2T3O75081 653 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 TUSC2O75896 110 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 SLU7O95391 586 aaKnown RBP4.87□□□□□ -1.63
KARSP3-201ENST00000571212 ONECUT2O95948 504 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 CALCAP01258 141 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 FYNP06241 537 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 FAM200BP0CF97 657 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 ZNF883P0CG24 379 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 ITGB6P18564 788 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 CERS1P27544 350 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 ARHGAP25P42331 645 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 ACADSBP45954 432 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 NAP1L1P55209 391 aaKnown RBP4.87□□□□□ -1.63
KARSP3-201ENST00000571212 HOXA4Q00056 320 aaPredicted RBP4.87□□□□□ -1.63
KARSP3-201ENST00000571212 PDCLQ13371 301 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 RAPGEF1Q13905 1077 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 SLC18A3Q16572 532 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 COL28A1Q2UY09 1125 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 ZIK1Q3SY52 487 aaPredicted RBP4.87□□□□□ -1.63
KARSP3-201ENST00000571212 PTPN20Q4JDL3 420 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 WDR45BQ5MNZ6 344 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 SFMBT2Q5VUG0 894 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 TTC19Q6DKK2 380 aaPredicted RBP4.87□□□□□ -1.63
KARSP3-201ENST00000571212 ACAD10Q6JQN1 1059 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 PPP1R2P3Q6NXS1 205 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 DENND1BQ6P3S1 775 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 TOGARAM2Q6ZUX3 1019 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 Q6ZWC4 215 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 MON1BQ7L1V2 547 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 PARS2Q7L3T8 475 aaKnown RBP4.87□□□□□ -1.63
KARSP3-201ENST00000571212 DAAM2Q86T65 1068 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 ZDHHC17Q8IUH5 632 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 NAXDQ8IW45 347 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 BBS7Q8IWZ6 715 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 CCDC170Q8IYT3 715 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 C9orf106Q8NAJ2 232 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 SLC20A1Q8WUM9 679 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 DNASE2BQ8WZ79 361 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 IRGQQ8WZA9 623 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 FBXO32Q969P5 355 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 MRGPRX1Q96LB2 322 aa4.87□□□□□ -1.63
KARSP3-201ENST00000571212 ZNF48Q96MX3 618 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms