RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 HEBP2Q9Y5Z4 205 aa16.35■□□□□ 0.21
COMMD4-224ENST00000568877 ASCC3Q8N3C0 2202 aaKnown RBP16.34■□□□□ 0.21
COMMD4-224ENST00000568877 DMXL1Q9Y485 3027 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 PRAMEF33A0A0G2JMD5 474 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 CCDC151A5D8V7 595 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 EIF3FO00303 357 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-224ENST00000568877 SHBGP04278 402 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 ENO3P13929 434 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-224ENST00000568877 PNLIPP16233 465 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 GCAP28676 217 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-224ENST00000568877 SERPINB9P50453 376 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 KRT33BQ14525 404 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 MROH9Q5TGP6 573 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 DUS1LQ6P1R4 473 aaKnown RBP16.34■□□□□ 0.21
COMMD4-224ENST00000568877 NEK10Q6ZWH5 1172 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 ZNF438Q7Z4V0 828 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 CEP97Q8IW35 865 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 RBM12BQ8IXT5 1001 aaKnown RBP16.34■□□□□ 0.21
COMMD4-224ENST00000568877 PHC3Q8NDX5 983 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 IFI44Q8TCB0 444 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 SKA2Q8WVK7 121 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-224ENST00000568877 SH3KBP1Q96B97 665 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 FERD3LQ96RJ6 166 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 POPDC3Q9HBV1 291 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 SLC40A1Q9NP59 571 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 DLL3Q9NYJ7 618 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 SLC24A2Q9UI40 661 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 TSR3Q9UJK0 312 aaKnown RBP16.34■□□□□ 0.21
COMMD4-224ENST00000568877 ASF1AQ9Y294 204 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 COLEC10Q9Y6Z7 277 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 PIKFYVEQ9Y2I7 2098 aa16.34■□□□□ 0.21
COMMD4-224ENST00000568877 ZFC3H1O60293 1989 aaKnown RBP16.33■□□□□ 0.21
COMMD4-224ENST00000568877 HMX2A2RU54 273 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 ERLIN1O75477 346 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 NUDT17P0C025 328 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 MPC1LP0DKB6 136 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 STMN1P16949 149 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 CNTFP26441 200 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 NDUFS1P28331 727 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 ACADVLP49748 655 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 RGS4P49798 205 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 NOVA1P51513 510 aaKnown RBP16.33■□□□□ 0.2
COMMD4-224ENST00000568877 IL2P60568 153 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 BMPR2Q13873 1038 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 ZNF460Q14592 562 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 PERM1Q5SV97 790 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 LRRC8EQ6NSJ5 796 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 ADGRD1Q6QNK2 874 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 UNC5DQ6UXZ4 953 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 CYHR1Q6ZMK1 362 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 TAOK1Q7L7X3 1001 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 CFAP61Q8NHU2 1237 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 EEF1AKMT1Q8WVE0 214 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 ZFPM2Q8WW38 1151 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 CCDC74AQ96AQ1 378 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 SLC38A3Q99624 504 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-224ENST00000568877 TRIT1Q9H3H1 467 aaKnown RBP16.33■□□□□ 0.2
COMMD4-224ENST00000568877 MVB12BQ9H7P6 319 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 UCK1Q9HA47 277 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 SYTL2Q9HCH5 934 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 GPAMQ9HCL2 828 aa16.33■□□□□ 0.2
COMMD4-224ENST00000568877 SPAARA0A1B0GVQ0 90 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 GIPC1O14908 333 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 KRT38O76015 456 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 KCNK5O95279 499 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 MATN4O95460 622 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 GP1BAP07359 652 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 ZNF37AP17032 561 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-224ENST00000568877 PTPRZ1P23471 2315 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-224ENST00000568877 GPR3P46089 330 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 RAB10P61026 200 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 ILKQ13418 452 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 GPR18Q14330 331 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 NR1D2Q14995 579 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 ZKSCAN8Q15776 578 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-224ENST00000568877 LGSNQ5TDP6 509 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 TMEM207Q6UWW9 146 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 TMEM26Q6ZUK4 368 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 ZNF761Q86XN6 746 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-224ENST00000568877 TBC1D21Q8IYX1 336 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 ARID1BQ8NFD5 2236 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-224ENST00000568877 OR5AR1Q8NGP9 310 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 OR5K2Q8NHB8 316 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 LINGO1Q96FE5 620 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 FOPNLQ96NB1 174 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 CCDC3Q9BQI4 270 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 PPCSQ9HAB8 311 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 TOR4AQ9NXH8 423 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 RUVBL2Q9Y230 463 aaKnown RBP16.32■□□□□ 0.2
COMMD4-224ENST00000568877 NFS1Q9Y697 457 aa16.32■□□□□ 0.2
COMMD4-224ENST00000568877 DCDC2BA2VCK2 349 aa16.31■□□□□ 0.2
COMMD4-224ENST00000568877 PHGDHO43175 533 aaKnown RBP16.31■□□□□ 0.2
COMMD4-224ENST00000568877 RFPL3O75679 317 aa16.31■□□□□ 0.2
COMMD4-224ENST00000568877 WISP3O95389 354 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-224ENST00000568877 TSPAN12O95859 305 aa16.31■□□□□ 0.2
COMMD4-224ENST00000568877 RPN2P04844 631 aa16.31■□□□□ 0.2
COMMD4-224ENST00000568877 CRABP2P29373 138 aa16.31■□□□□ 0.2
COMMD4-224ENST00000568877 ALDH4A1P30038 563 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms