RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 ASB8Q9H765 288 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 MVB12BQ9H7P6 319 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 VPS37BQ9H9H4 285 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 ASF1BQ9NVP2 202 aa15.28■□□□□ 0.04
HERPUD1-215ENST00000568676 ZNF749O43361 778 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 KLF7O75840 302 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 ANXA9O76027 345 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 SRP72O76094 671 aaKnown RBP15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 LCA5LO95447 670 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 TPM3P06753 285 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 GSTM1P09488 218 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 ST6GAL1P15907 406 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 ARCN1P48444 511 aaKnown RBP15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 SOX8P57073 446 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 GSTM4Q03013 218 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 TAZQ16635 292 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 KYNUQ16719 465 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 PTCHD3Q3KNS1 767 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 PLEKHN1Q494U1 663 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 DCAF10Q5QP82 559 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 ZNF385CQ66K41 422 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 FBXO38Q6PIJ6 1188 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 ZNF567Q8N184 647 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 GALNT16Q8N428 558 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 ZADH2Q8N4Q0 377 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 PROKR1Q8TCW9 393 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 COG1Q8WTW3 980 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 P3H4Q92791 437 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 N4BP2L2Q92802 583 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 TCTN2Q96GX1 697 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 OXNAD1Q96HP4 312 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 PPM1MQ96MI6 270 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 TRAPPC9Q96Q05 1148 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 BARD1Q99728 777 aaKnown RBP15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 AGPAT4Q9NRZ5 378 aa15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 GPN3Q9UHW5 284 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 COPG1Q9Y678 874 aaKnown RBP15.27■□□□□ 0.04
HERPUD1-215ENST00000568676 HIVEP3Q5T1R4 2406 aa15.27■□□□□ 0.03
HERPUD1-215ENST00000568676 HACD1B0YJ81 288 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 BUD23O43709 281 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 KRT86O43790 486 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 CST8O60676 142 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 POLBP06746 335 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 OTX2P32243 289 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 CA5AP35218 305 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 FOLR3P41439 243 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 CDKN2BP42772 138 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 GEMP55040 296 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 RPA4Q13156 261 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 ASTE1Q2TB18 679 aaPredicted RBP15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 FAM182AQ5T1J6 154 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 RHBDD2Q6NTF9 364 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 MFSD7Q6UXD7 560 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 B4GALNT4Q76KP1 1039 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 HOOK3Q86VS8 718 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 AMIGO1Q86WK6 493 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 CISD2Q8N5K1 135 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 C19orf60Q96EN9 201 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 FERD3LQ96RJ6 166 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 FERMT1Q9BQL6 677 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 AP1M1Q9BXS5 423 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 ZNHIT6Q9NWK9 470 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 FAM8A1Q9UBU6 413 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 CRLS1Q9UJA2 301 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 SRPK3Q9UPE1 567 aa15.26■□□□□ 0.03
HERPUD1-215ENST00000568676 BTN3A1O00481 513 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 SGTAO43765 313 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 AKR1B10O60218 316 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 CRTAMO95727 393 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 LMAN1P49257 510 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 PER3P56645 1201 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 DCDP81605 110 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 GPR33Q49SQ1 333 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 TFDP3Q5H9I0 405 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 Q6ZS92 163 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 OR2Y1Q8NGV0 311 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 PTERQ96BW5 349 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 RBM41Q96IZ5 413 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 COPS8Q99627 209 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 ZNF552Q9H707 407 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 SAE1Q9UBE0 346 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 NDOR1Q9UHB4 597 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 RSPH14Q9UHP6 348 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 ARL5AQ9Y689 179 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 ITPR2Q14571 2701 aa15.25■□□□□ 0.03
HERPUD1-215ENST00000568676 CCDC66A2RUB6 948 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 GOLGA6L19H0YKK7 550 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 BTN3A3O00478 584 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 PSTPIP1O43586 416 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 OR2B3O76000 313 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 ATP1B2P14415 290 aaPredicted RBP15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 PECAM1P16284 738 aaPredicted RBP15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 ITGALP20701 1170 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 COL8A1P27658 744 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 RAPSNQ13702 412 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 TRIM14Q14142 442 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 TCEAL1Q15170 157 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 CRB2Q5IJ48 1285 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 FAM69BQ5VUD6 431 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms