RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 CCDC70Q6NSX1 233 aa15.65■□□□□ 0.1
CLK3-223ENST00000568488 RHBDD2Q6NTF9 364 aa15.65■□□□□ 0.1
CLK3-223ENST00000568488 XKRXQ6PP77 449 aa15.65■□□□□ 0.1
CLK3-223ENST00000568488 DET1Q7L5Y6 550 aa15.65■□□□□ 0.1
CLK3-223ENST00000568488 MMP21Q8N119 569 aa15.65■□□□□ 0.1
CLK3-223ENST00000568488 FATE1Q969F0 183 aa15.65■□□□□ 0.1
CLK3-223ENST00000568488 TRIB3Q96RU7 358 aa15.65■□□□□ 0.1
CLK3-223ENST00000568488 MRPL47Q9HD33 250 aaKnown RBP15.65■□□□□ 0.1
CLK3-223ENST00000568488 IRAK4Q9NWZ3 460 aa15.65■□□□□ 0.1
CLK3-223ENST00000568488 ACSL5Q9ULC5 683 aa15.65■□□□□ 0.1
CLK3-223ENST00000568488 CNTRLQ7Z7A1 2325 aa15.65■□□□□ 0.1
CLK3-223ENST00000568488 C19orf84I3L1E1 186 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 BTN3A3O00478 584 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 UNC5CO95185 931 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 HOXB4P17483 251 aaPredicted RBP15.64■□□□□ 0.09
CLK3-223ENST00000568488 PBX1P40424 430 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 TDGF1P3P51864 188 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 PPP2R5EQ16537 467 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 DEFB110Q30KQ9 67 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 NKAIN1Q4KMZ8 207 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 RPUSD3Q6P087 351 aaKnown RBP15.64■□□□□ 0.09
CLK3-223ENST00000568488 MRPL14Q6P1L8 145 aaKnown RBP15.64■□□□□ 0.09
CLK3-223ENST00000568488 IRF2BP2Q7Z5L9 587 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 HOOK3Q86VS8 718 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 CEP97Q8IW35 865 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 PROKR1Q8TCW9 393 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 CHTF18Q8WVB6 975 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 NR4A3Q92570 626 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 THOC3Q96J01 351 aaKnown RBP15.64■□□□□ 0.09
CLK3-223ENST00000568488 FERD3LQ96RJ6 166 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 NRTNQ99748 197 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 CEP41Q9BYV8 373 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 XPO4Q9C0E2 1151 aaKnown RBP15.64■□□□□ 0.09
CLK3-223ENST00000568488 LHPPQ9H008 270 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 CBX8Q9HC52 389 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 SPO11Q9Y5K1 396 aa15.64■□□□□ 0.09
CLK3-223ENST00000568488 MGAT4DA6NG13 374 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 BTN3A1O00481 513 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 GPR39O43194 453 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 CD1EP15812 388 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 AKT1P31749 480 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 UBXN1Q04323 297 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 TLE4Q04727 773 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 SRSF11Q05519 484 aaKnown RBP15.63■□□□□ 0.09
CLK3-223ENST00000568488 ZBTB17Q13105 803 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 CCDC183Q5T5S1 534 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 GPRC6AQ5T6X5 926 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 ZNF324BQ6AW86 544 aaPredicted RBP15.63■□□□□ 0.09
CLK3-223ENST00000568488 ISLR2Q6UXK2 745 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 NT5DC3Q86UY8 548 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 ZNF655Q8N720 491 aaPredicted RBP15.63■□□□□ 0.09
CLK3-223ENST00000568488 CNTD1Q8N815 330 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 NAT14Q8WUY8 206 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 RMDN2Q96LZ7 410 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 TAAR6Q96RI8 345 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 SYT11Q9BT88 431 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 PITPNM3Q9BZ71 974 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 FAM60AQ9NP50 221 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 IL26Q9NPH9 171 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 NEU2Q9Y3R4 380 aa15.63■□□□□ 0.09
CLK3-223ENST00000568488 KLHL18O94889 574 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 MSH3P20585 1137 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 MX2P20592 715 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 ALAS2P22557 587 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 MMP11P24347 488 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 GJC1P36383 396 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 CA7P43166 264 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 ARG2P78540 354 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 SLC25A11Q02978 314 aaKnown RBP15.62■□□□□ 0.09
CLK3-223ENST00000568488 GBE1Q04446 702 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 MFAP5Q13361 173 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 PIGHQ14442 188 aaPredicted RBP15.62■□□□□ 0.09
CLK3-223ENST00000568488 LONRF2Q1L5Z9 754 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 FAM151BQ6UXP7 276 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 CFAP206Q8IYR0 622 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 ACVR1CQ8NER5 493 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 BTBD6Q96KE9 485 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 SEC14L3Q9UDX4 400 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 HEBP2Q9Y5Z4 205 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 DOCK10Q96BY6 2186 aa15.62■□□□□ 0.09
CLK3-223ENST00000568488 C2orf74A8MZ97 194 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 SOCS6O14544 535 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 ZSCAN9O15535 394 aaPredicted RBP15.61■□□□□ 0.09
CLK3-223ENST00000568488 HCRTR1O43613 425 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 CTSBP07858 339 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 ESRRAP11474 423 aaPredicted RBP15.61■□□□□ 0.09
CLK3-223ENST00000568488 SPAM1P38567 509 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 Q0VFX4 171 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 DPYSL3Q14195 570 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 ATP13A4Q4VNC1 1196 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 CDKAL1Q5VV42 579 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 KCTD6Q8NC69 237 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 DDHD1Q8NEL9 900 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 ANKRD20A12PQ8NF67 263 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 OR2L2Q8NH16 312 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 NACC2Q96BF6 587 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 MTFMTQ96DP5 389 aaKnown RBP15.61■□□□□ 0.09
CLK3-223ENST00000568488 C14orf79Q96F83 325 aa15.61■□□□□ 0.09
CLK3-223ENST00000568488 IMP4Q96G21 291 aaKnown RBP15.61■□□□□ 0.09
CLK3-223ENST00000568488 RBM41Q96IZ5 413 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms