RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SNX1Q13596 522 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 CCNG2Q16589 344 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 DBN1Q16643 649 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 ZNF658BQ4V348 819 aaPredicted RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 CCDC38Q502W7 563 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 DNTTIP2Q5QJE6 756 aaKnown RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 TMTC4Q5T4D3 741 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 DUS1LQ6P1R4 473 aaKnown RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 DRICH1Q6PGQ1 229 aaPredicted RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 AFTPHQ6ULP2 937 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 C6orf15Q6UXA7 325 aaPredicted RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 CERS6Q6ZMG9 384 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 PPP1R21Q6ZMI0 780 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 NLRP9Q7RTR0 991 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 LRRC8AQ8IWT6 810 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 PIANPQ8IYJ0 282 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 D2HGDHQ8N465 521 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 TAB3Q8N5C8 712 aaPredicted RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 LILRA3Q8N6C8 439 aaPredicted RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 CLDN19Q8N6F1 224 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 EXD3Q8N9H8 876 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 ACVR1CQ8NER5 493 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 TRIM58Q8NG06 486 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 OR52K1Q8NGK4 314 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 OR13J1Q8NGT2 312 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 NAT14Q8WUY8 206 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 MAIP1Q8WWC4 291 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 C1orf54Q8WWF1 131 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 STARD8Q92502 1023 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 PEX13Q92968 403 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.66□□□□□ -1.66
CLK3-219ENST00000567805 STAMBPL1Q96FJ0 436 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 SGSM3Q96HU1 749 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 FERD3LQ96RJ6 166 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 RANBP9Q96S59 729 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 TTC1Q99614 292 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 MAP3K3Q99759 626 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 OR52A5Q9H2C5 316 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 ADNPQ9H2P0 1102 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 TFB2MQ9H5Q4 396 aaKnown RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 MVB12BQ9H7P6 319 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 PDE7BQ9NP56 450 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 LZTFL1Q9NQ48 299 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 CASS4Q9NQ75 786 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 RAB6BQ9NRW1 208 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 STARD5Q9NSY2 213 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 PIH1D1Q9NWS0 290 aaKnown RBP4.66□□□□□ -1.66
CLK3-219ENST00000567805 SMARCAL1Q9NZC9 954 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 SLC24A2Q9UI40 661 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 TUBD1Q9UJT1 453 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 RARRES3Q9UL19 164 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 RPS6KL1Q9Y6S9 549 aa4.66□□□□□ -1.66
CLK3-219ENST00000567805 CCDC78A2IDD5 438 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 GSAPA4D1B5 854 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 OR51F1A6NGY5 319 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 C21orf140B9A014 251 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 J3QKU1 62 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 CPNE3O75131 537 aaKnown RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 GOT2P00505 430 aaKnown RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 FGGP02679 453 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 OR56A5P0C7T3 313 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 MSL3P1P0C860 447 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 EBLN1P0CF75 366 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 PRKAR1AP10644 381 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 ETS1P14921 441 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 FOLR1P15328 257 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 POLR2CP19387 275 aaPredicted RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 TCN2P20062 427 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 F8A1P23610 371 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 PDHA2P29803 388 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 RPL22P35268 128 aaKnown RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 DLSTP36957 453 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 PPARGP37231 505 aaPredicted RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 GRIA1P42261 906 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 CCR10P46092 362 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 PREPP48147 710 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 KPNA2P52292 529 aaKnown RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 POLE2P56282 527 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 TUBB4BP68371 445 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 PRAMEP78395 509 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 CCZ1BP86790 482 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 CCZ1P86791 482 aaPredicted RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 CDK16Q00536 496 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 NFATC3Q12968 1075 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 TUBB2AQ13885 445 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 BOP1Q14137 746 aaKnown RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 KCNAB1Q14722 419 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 SIX1Q15475 284 aaPredicted RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 TUSC1Q2TAM9 212 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 SYTL3Q4VX76 610 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 FASTKD1Q53R41 847 aaKnown RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 AARS2Q5JTZ9 985 aaKnown RBP4.65□□□□□ -1.67
CLK3-219ENST00000567805 TSTD2Q5T7W7 516 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 PWWP2BQ6NUJ5 590 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 GSTA5Q7RTV2 222 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 PACS2Q86VP3 889 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 AMIGO1Q86WK6 493 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 TBC1D21Q8IYX1 336 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 UNC5BQ8IZJ1 945 aa4.65□□□□□ -1.67
CLK3-219ENST00000567805 GLIS1Q8NBF1 620 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms