RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SLC30A3Q99726 388 aa11.22□□□□□ -0.61
KARS-207ENST00000566560 DHRS4Q9BTZ2 278 aa11.22□□□□□ -0.61
KARS-207ENST00000566560 OR52A5Q9H2C5 316 aa11.22□□□□□ -0.61
KARS-207ENST00000566560 STN1Q9H668 368 aaKnown RBP11.22□□□□□ -0.61
KARS-207ENST00000566560 CAB39LQ9H9S4 337 aa11.22□□□□□ -0.61
KARS-207ENST00000566560 WASH6PQ9NQA3 447 aa11.22□□□□□ -0.61
KARS-207ENST00000566560 ARGLU1Q9NWB6 273 aaPredicted RBP11.22□□□□□ -0.61
KARS-207ENST00000566560 NCKIPSDQ9NZQ3 722 aa11.22□□□□□ -0.61
KARS-207ENST00000566560 SCHIP1Q9P0W5 487 aaPredicted RBP11.22□□□□□ -0.61
KARS-207ENST00000566560 PSMC3IPQ9P2W1 217 aaPredicted RBP11.22□□□□□ -0.61
KARS-207ENST00000566560 GALPQ9UBC7 116 aa11.22□□□□□ -0.61
KARS-207ENST00000566560 FETUBQ9UGM5 382 aa11.22□□□□□ -0.61
KARS-207ENST00000566560 ZNF180Q9UJW8 692 aa11.22□□□□□ -0.61
KARS-207ENST00000566560 CDV3Q9UKY7 258 aaKnown RBP11.22□□□□□ -0.61
KARS-207ENST00000566560 PCOLCE2Q9UKZ9 415 aa11.22□□□□□ -0.61
KARS-207ENST00000566560 MTO1Q9Y2Z2 717 aaKnown RBP11.22□□□□□ -0.61
KARS-207ENST00000566560 VWA7Q9Y334 891 aa11.22□□□□□ -0.61
KARS-207ENST00000566560 SMIM23A6NLE4 172 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 OR5K4A6NMS3 321 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 OR52A4PA6NMU1 304 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 SH3BP5O60239 455 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 GPC4O75487 556 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 KRT38O76015 456 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 SLCO2B1O94956 709 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 MTHFD1P11586 935 aaKnown RBP11.21□□□□□ -0.61
KARS-207ENST00000566560 ENO3P13929 434 aaPredicted RBP11.21□□□□□ -0.61
KARS-207ENST00000566560 STMN1P16949 149 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 ZNF37AP17032 561 aaPredicted RBP11.21□□□□□ -0.61
KARS-207ENST00000566560 CD9P21926 228 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 RGS4P49798 205 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 SERPINB8P50452 374 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 PGGT1BP53609 377 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 TAS2R39P59534 338 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 SH3BP2P78314 561 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 DAB2P98082 770 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 TIAL1Q01085 375 aaKnown RBP eCLIP11.21□□□□□ -0.61
KARS-207ENST00000566560 VAC14Q08AM6 782 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 IFFO1Q0D2I5 559 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 GBX1Q14549 363 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 ZNF460Q14592 562 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 USP10Q14694 798 aaKnown RBP11.21□□□□□ -0.61
KARS-207ENST00000566560 CLCA4Q14CN2 919 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 NR0B2Q15466 257 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 ACSBG2Q5FVE4 666 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 MROH9Q5TGP6 573 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 DUS1LQ6P1R4 473 aaKnown RBP11.21□□□□□ -0.61
KARS-207ENST00000566560 IYDQ6PHW0 289 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 ABRAXAS1Q6UWZ7 409 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 DBX2Q6ZNG2 339 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 VRK3Q8IV63 474 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 FAM181AQ8N9Y4 354 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 AVL9Q8NBF6 648 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 GPR156Q8NFN8 814 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 EPS8L3Q8TE67 593 aaKnown RBP11.21□□□□□ -0.61
KARS-207ENST00000566560 RHBDD1Q8TEB9 315 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 INPP5DQ92835 1189 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 CXorf40BQ96DE9 158 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 CNDP2Q96KP4 475 aaKnown RBP11.21□□□□□ -0.61
KARS-207ENST00000566560 APOLD1Q96LR9 279 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 PPCSQ9HAB8 311 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 LATS2Q9NRM7 1088 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 POT1Q9NUX5 634 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 KLHL42Q9P2K6 505 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 SLC24A2Q9UI40 661 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 CDYLQ9Y232 598 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 DHRS7Q9Y394 339 aa11.21□□□□□ -0.61
KARS-207ENST00000566560 CFAP20Q9Y6A4 193 aaKnown RBP11.21□□□□□ -0.61
KARS-207ENST00000566560 FRYLO94915 3013 aa11.21□□□□□ -0.62
KARS-207ENST00000566560 TRBV23OR9-2A0A075B6M9 112 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 LY6G6EA0A0G2JKS1 128 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 POM121CA8CG34 1229 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 PHGDHO43175 533 aaKnown RBP11.2□□□□□ -0.62
KARS-207ENST00000566560 KRT37O76014 449 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 CBSLP0DN79 551 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 MYF5P13349 255 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 CNTFP26441 200 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 GCAP28676 217 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 CBSP35520 551 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 SKIV2L2P42285 1042 aaKnown RBP11.2□□□□□ -0.62
KARS-207ENST00000566560 SLCO1A2P46721 670 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 RAB10P61026 200 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 UBE2IP63279 158 aaKnown RBP11.2□□□□□ -0.62
KARS-207ENST00000566560 HHEXQ03014 270 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 ZKSCAN8Q15776 578 aaPredicted RBP11.2□□□□□ -0.62
KARS-207ENST00000566560 RPE65Q16518 533 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 LRRC8EQ6NSJ5 796 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 OGFOD3Q6PK18 319 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 PAQR3Q6TCH7 311 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 RAPH1Q70E73 1250 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 PIWIL4Q7Z3Z4 852 aaKnown RBP11.2□□□□□ -0.62
KARS-207ENST00000566560 CMC1Q7Z7K0 106 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 SLC9B2Q86UD5 537 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 ALYREFQ86V81 257 aaKnown RBP11.2□□□□□ -0.62
KARS-207ENST00000566560 BPHLQ86WA6 291 aaPredicted RBP11.2□□□□□ -0.62
KARS-207ENST00000566560 C17orf82Q86X59 251 aaPredicted RBP11.2□□□□□ -0.62
KARS-207ENST00000566560 CEP97Q8IW35 865 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 OR2W6PQ8NHA6 318 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 BAHD1Q8TBE0 780 aaPredicted RBP11.2□□□□□ -0.62
KARS-207ENST00000566560 LINGO1Q96FE5 620 aa11.2□□□□□ -0.62
KARS-207ENST00000566560 CAMK1GQ96NX5 476 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms