RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 U3KQV3 271 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 KDRP35968 1356 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 DHX29Q7Z478 1369 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 ANKUB1A6NFN9 424 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 F8W810 466 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 TMEM189-UBE2V1I3L0A0 370 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 PPEF2O14830 753 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 MAGEB3O15480 346 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 PEX1O43933 1283 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 SSX5O60225 188 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 TSPAN1O60635 241 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 ATP9AO75110 1047 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 GMNNO75496 209 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 SPDEFO95238 335 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 CXCL14O95715 111 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 MT-CO3P00414 261 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 PLGP00747 810 aaPredicted RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 EGFP01133 1207 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 RAB40ALP0C0E4 278 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 ITGAMP11215 1152 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 GZMAP12544 262 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 CPA3P15088 417 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 CYP2F1P24903 491 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 PCSK6P29122 969 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 TIA1P31483 386 aaKnown RBP eCLIP3.25□□□□□ -1.895e-7■■□□□ 13.2
HERPUD1-211ENST00000566550 TAGLN2P37802 199 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 CDKN1AP38936 164 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 EIF2S3P41091 472 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 MTIF2P46199 727 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 NPBWR1P48145 328 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 METAP2P50579 478 aaKnown RBP eCLIP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 HNRNPFP52597 415 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 NUDT6P53370 316 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 METAP1P53582 386 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 PPP2CBP62714 309 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 PPP2CAP67775 309 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 PMPCAQ10713 525 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 IFT88Q13099 833 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 SPP2Q13103 211 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 UBE2V1Q13404 147 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 STIM1Q13586 685 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 TP53BP2Q13625 1128 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 ICAM4Q14773 271 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 EIF2S3LQ2VIR3 472 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 EPC2Q52LR7 807 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 HSP90AB3PQ58FF7 597 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 PLAC9Q5JTB6 97 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 LRRC38Q5VT99 294 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 KCTD11Q693B1 232 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 NAIF1Q69YI7 327 aaPredicted RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 PMF1Q6P1K2 205 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 ZNF585AQ6P3V2 769 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 VWA1Q6PCB0 445 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 VSTM1Q6UX27 236 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 ZYG11AQ6WRX3 759 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 C15orf52Q6ZUT6 534 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 TRILQ7L0X0 811 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 MEPCEQ7L2J0 689 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 BCDIN3DQ7Z5W3 292 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 ZNF573Q86YE8 665 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 UEVLDQ8IX04 471 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 PM20D2Q8IYS1 436 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 LINC01465Q8N7H1 131 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 C8orf58Q8NAV2 365 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 OR52M1Q8NGK5 317 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 EXD1Q8NHP7 514 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 B4GALNT2Q8NHY0 566 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 HDAC7Q8WUI4 952 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 ZNF75CPQ92670 426 aaPredicted RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 SYN2Q92777 582 aaPredicted RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 KAT2BQ92831 832 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 ERGIC1Q969X5 290 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 SLC25A28Q96A46 364 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 ALG14Q96F25 216 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 LINGO1Q96FE5 620 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 QRFPRQ96P65 431 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 ZNF416Q9BWM5 594 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 FSD1LQ9BXM9 530 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 MOV10L1Q9BXT6 1211 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 RAB33BQ9H082 229 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 NAPBQ9H115 298 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 MEGF9Q9H1U4 602 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 CDT1Q9H211 546 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 SNX25Q9H3E2 840 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 GORASP2Q9H8Y8 452 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 SEC61A2Q9H9S3 476 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 MSL2Q9HCI7 577 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 TM9SF3Q9HD45 589 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 CYSLTR2Q9NS75 346 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 ACSS1Q9NUB1 689 aaPredicted RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 RBM28Q9NW13 759 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 SMPD3Q9NY59 655 aaPredicted RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 RAI14Q9P0K7 980 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 KCNN3Q9UGI6 736 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 RCOR1Q9UKL0 485 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 ST3GAL5Q9UNP4 418 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 PLEKHA6Q9Y2H5 1048 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 PADI2Q9Y2J8 665 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 CAB39Q9Y376 341 aaPredicted RBP3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 JRKLQ9Y4A0 524 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms