RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 PRSS56P0CW18 603 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 CDH3P22223 829 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 MSNP26038 577 aaKnown RBP19.61■□□□□ 0.73
CLN6-207ENST00000566347 FDFT1P37268 417 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 ARCN1P48444 511 aaKnown RBP19.61■□□□□ 0.73
CLN6-207ENST00000566347 CDH17Q12864 832 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 ITIH4Q14624 930 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 GPR19Q15760 415 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 DBN1Q16643 649 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 PTRH1Q86Y79 214 aaKnown RBP19.61■□□□□ 0.73
CLN6-207ENST00000566347 TMEM126BQ8IUX1 230 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 CLDN19Q8N6F1 224 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 DNAAF3Q8N9W5 541 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 ATG4AQ8WYN0 398 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.61■□□□□ 0.73
CLN6-207ENST00000566347 ZNF501Q96CX3 271 aaPredicted RBP19.61■□□□□ 0.73
CLN6-207ENST00000566347 TRIM4Q9C037 500 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 SYTL2Q9HCH5 934 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 SMARCAL1Q9NZC9 954 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 KCNMB2Q9Y691 235 aa19.61■□□□□ 0.73
CLN6-207ENST00000566347 PIPSLA2A3N6 862 aa19.6■□□□□ 0.73
CLN6-207ENST00000566347 GSAPA4D1B5 854 aa19.6■□□□□ 0.73
CLN6-207ENST00000566347 LIN7AO14910 233 aaPredicted RBP19.6■□□□□ 0.73
CLN6-207ENST00000566347 MAP3K7O43318 606 aa19.6■□□□□ 0.73
CLN6-207ENST00000566347 LIASO43766 372 aa19.6■□□□□ 0.73
CLN6-207ENST00000566347 KRT86O43790 486 aa19.6■□□□□ 0.73
CLN6-207ENST00000566347 FTH1P02794 183 aa19.6■□□□□ 0.73
CLN6-207ENST00000566347 OASLQ15646 514 aaKnown RBP19.6■□□□□ 0.73
CLN6-207ENST00000566347 PACS1Q6VY07 963 aa19.6■□□□□ 0.73
CLN6-207ENST00000566347 TAB3Q8N5C8 712 aaPredicted RBP19.6■□□□□ 0.73
CLN6-207ENST00000566347 OR52K1Q8NGK4 314 aa19.6■□□□□ 0.73
CLN6-207ENST00000566347 TFGQ92734 400 aaPredicted RBP19.6■□□□□ 0.73
CLN6-207ENST00000566347 ABHD17AQ96GS6 310 aa19.6■□□□□ 0.73
CLN6-207ENST00000566347 TWSG1Q9GZX9 223 aa19.6■□□□□ 0.73
CLN6-207ENST00000566347 ANAPC2Q9UJX6 822 aa19.6■□□□□ 0.73
CLN6-207ENST00000566347 HEATR9A2RTY3 570 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 CDC14CA4D256 554 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 SLC9B1P1A6NJY1 282 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 SUN1O94901 812 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 IFNB1P01574 187 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 PDHA2P29803 388 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 PREPP48147 710 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 LMAN1P49257 510 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 RPS15P62841 145 aaKnown RBP19.59■□□□□ 0.73
CLN6-207ENST00000566347 BOP1Q14137 746 aaKnown RBP19.59■□□□□ 0.73
CLN6-207ENST00000566347 LACTB2Q53H82 288 aaPredicted RBP19.59■□□□□ 0.73
CLN6-207ENST00000566347 LYPLAL1Q5VWZ2 237 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 PPP1R21Q6ZMI0 780 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 AMIGO1Q86WK6 493 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 SLC13A5Q86YT5 568 aaPredicted RBP19.59■□□□□ 0.73
CLN6-207ENST00000566347 OR52E1Q8NGJ3 308 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 PPM1MQ96MI6 270 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 TTC1Q99614 292 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 ACTL8Q9H568 366 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 ETNK1Q9HBU6 452 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 ZNF71Q9NQZ8 489 aaPredicted RBP19.59■□□□□ 0.73
CLN6-207ENST00000566347 GUCA1BQ9UMX6 200 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 ZNF148Q9UQR1 794 aa19.59■□□□□ 0.73
CLN6-207ENST00000566347 UBR5O95071 2799 aaPredicted RBP19.58■□□□□ 0.73
CLN6-207ENST00000566347 CCDC78A2IDD5 438 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 E7EVH7 732 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 F8W8V4 182 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 MKRN2OSH3BPM6 223 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 BTN3A1O00481 513 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 FURINP09958 794 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 MSL3P1P0C860 447 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 PTPN4P29074 926 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 PRDX3P30048 256 aaKnown RBP19.58■□□□□ 0.72
CLN6-207ENST00000566347 FOXN2P32314 431 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 GSDMDP57764 484 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 PLOD1Q02809 727 aaPredicted RBP19.58■□□□□ 0.72
CLN6-207ENST00000566347 TLE1Q04724 770 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 CCDC38Q502W7 563 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 FBXO38Q6PIJ6 1188 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 PHC3Q8NDX5 983 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 LRFN5Q96NI6 719 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 RANBP9Q96S59 729 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 HGH1Q9BTY7 390 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 TLR10Q9BXR5 811 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 PITPNM3Q9BZ71 974 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 RIMKLBQ9ULI2 386 aa19.58■□□□□ 0.72
CLN6-207ENST00000566347 CCDC162PA2VCL2 907 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 C2orf74A8MZ97 194 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 BTN3A3O00478 584 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 RFPL1O75677 317 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 KLK3P07288 261 aaPredicted RBP19.57■□□□□ 0.72
CLN6-207ENST00000566347 OR56A5P0C7T3 313 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 CASRP41180 1078 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 PMS2P54278 862 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 FAM199XQ6PEV8 388 aaPredicted RBP19.57■□□□□ 0.72
CLN6-207ENST00000566347 AFTPHQ6ULP2 937 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 MICALCLQ6ZW33 695 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 NLRP9Q7RTR0 991 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 SYVN1Q86TM6 617 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 OR13J1Q8NGT2 312 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 CPT1BQ92523 772 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 ELMO1Q92556 727 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 MR1Q95460 341 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 MAN2B2Q9Y2E5 1009 aa19.57■□□□□ 0.72
CLN6-207ENST00000566347 PRSS21Q9Y6M0 314 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms