RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CRYBB1P53674 252 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 PDAP1Q13442 181 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 FASTKD1Q53R41 847 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 ZC3H14Q6PJT7 736 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 LIMS2Q7Z4I7 341 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PPIL6Q8IXY8 311 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CMTM8Q8IZV2 173 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 GRPEL2Q8TAA5 225 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ACTRT2Q8TDY3 377 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TMEM159Q96B96 161 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 AARSD1Q9BTE6 412 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 C11orf49Q9H6J7 331 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ZNF334Q9HCZ1 680 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 SUSD2Q9UGT4 822 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 INVSQ9Y283 1065 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 HS3ST4Q9Y661 456 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 WASF2Q9Y6W5 498 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 HHLA1C9JL84 531 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ADAMDEC1O15204 470 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 INPP4BO15327 924 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 KLKB1P03952 638 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 UBTFL6P0CB48 400 aaPredicted RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 SERPINA4P29622 427 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 FMO4P31512 558 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ACSL1P33121 698 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 GSSP48637 474 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ART3Q13508 389 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 PRAMEF14Q5SWL7 426 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 CERS6Q6ZMG9 384 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 LINC00299Q6ZSB3 139 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 HPS6Q86YV9 775 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 P3H2Q8IVL5 708 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 NKAPQ8N5F7 415 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 ANKRD52Q8NB46 1076 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 PDPRQ8NCN5 879 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SLC35B2Q8TB61 432 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 FNDC8Q8TC99 324 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 METTL6Q8TCB7 284 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ANKRD49Q8WVL7 239 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 REXO5Q96IC2 774 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 NFKBIZQ9BYH8 718 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ACTR6Q9GZN1 396 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SDHAF3Q9NRP4 125 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 CCDC167Q9P0B6 97 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ZDHHC2Q9UIJ5 367 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 IKZF3Q9UKT9 509 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 TPRKBQ9Y3C4 175 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 PCDHB11Q9Y5F2 797 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 PRR5-ARHGAP8B1AHC4 643 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 LATS1O95835 1130 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ARL4DP49703 201 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 DAOAP59103 153 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ERVFC1P60507 584 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ARHGAP8P85298 464 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 RASGEF1BQ0VAM2 473 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ADGRF1Q5T601 910 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 MZT2AQ6P582 158 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 MARK2Q7KZI7 788 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 DGLUCYQ7Z3D6 616 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 KATNAL2Q8IYT4 538 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 CYGBQ8WWM9 190 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ZNF670Q9BS34 389 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 FAIM2Q9BWQ8 316 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 TRIT1Q9H3H1 467 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 WDR6Q9NNW5 1121 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 KLQ9UEF7 1012 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ERVW-1Q9UQF0 538 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SDK1Q7Z5N4 2213 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 H0YC42 278 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 TLR5O60602 858 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 MED26O95402 600 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 NUDT14O95848 222 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SERPINF2P08697 491 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 PRPS2P11908 318 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 POLR2EP19388 210 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 FBXO43Q4G163 708 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 BRMS1LQ5PSV4 323 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 IER5LQ5T953 404 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ANXA8L1Q5VT79 327 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SLC25A25Q6KCM7 469 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 FSTL4Q6MZW2 842 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 LCLAT1Q6UWP7 414 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 BHLHA9Q7RTU4 235 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 IFNEQ86WN2 208 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 DCP2Q8IU60 420 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 KLHDC8BQ8IXV7 354 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 FBXO32Q969P5 355 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 KLHL29Q96CT2 875 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 MTRRQ9UBK8 725 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 HBS1LQ9Y450 684 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 SLC30A1Q9Y6M5 507 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 AIM2O14862 343 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 UMPSP11172 480 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ETS2P15036 469 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 PSMA1P25786 263 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 TYK2P29597 1187 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 EEF1DP29692 281 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 SNRPD1P62314 119 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 PKDCCQ504Y2 493 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 FAM209AQ5JX71 171 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms