RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 RAP1GAP2Q684P5 730 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 LRRC8DQ7L1W4 858 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 VASH1Q7L8A9 365 aaPredicted RBP20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 NLGN2Q8NFZ4 835 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ISG20Q96AZ6 181 aaKnown RBP20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 OSER1Q9NX31 292 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PCDHGA3Q9Y5H0 932 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MFN2O95140 757 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ITIH1P19827 911 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 TRPC1P48995 793 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MAPKAPK3Q16644 382 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 DESI1Q6ICB0 168 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CEP68Q76N32 757 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 GPSM1Q86YR5 675 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 S100ZQ8WXG8 99 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ZBED2Q9BTP6 218 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 TFB2MQ9H5Q4 396 aaKnown RBP20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 TSC2P49815 1807 aa20.15■□□□□ 0.82
MAP1LC3B-206ENST00000564844 LTBP3Q9NS15 1303 aa20.14■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SERPINB10P48595 397 aa20.14■□□□□ 0.82
MAP1LC3B-206ENST00000564844 GPR15P49685 360 aa20.14■□□□□ 0.82
MAP1LC3B-206ENST00000564844 FAM189BP81408 668 aa20.14■□□□□ 0.82
MAP1LC3B-206ENST00000564844 EFEMP1Q12805 493 aa20.14■□□□□ 0.82
MAP1LC3B-206ENST00000564844 TP53BP2Q13625 1128 aa20.14■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PON2Q15165 354 aa20.14■□□□□ 0.82
MAP1LC3B-206ENST00000564844 RSBN1Q5VWQ0 802 aaPredicted RBP20.14■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PIANPQ8IYJ0 282 aa20.14■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CELF2-AS1Q8N7Q2 184 aa20.14■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CDKN2AIPNLQ96HQ2 116 aa20.14■□□□□ 0.82
MAP1LC3B-206ENST00000564844 DMRTB1Q96MA1 342 aa20.14■□□□□ 0.82
MAP1LC3B-206ENST00000564844 TRIT1Q9H3H1 467 aaKnown RBP20.14■□□□□ 0.82
MAP1LC3B-206ENST00000564844 GPR182O15218 404 aa20.14■□□□□ 0.81
MAP1LC3B-206ENST00000564844 GABARAPO95166 117 aa20.14■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SNAI1O95863 264 aaPredicted RBP20.14■□□□□ 0.81
MAP1LC3B-206ENST00000564844 EFNA1P20827 205 aaPredicted RBP20.14■□□□□ 0.81
MAP1LC3B-206ENST00000564844 IGFBP5P24593 272 aa20.14■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ZNF691Q5VV52 312 aa20.14■□□□□ 0.81
MAP1LC3B-206ENST00000564844 TAS2R42Q7RTR8 314 aa20.14■□□□□ 0.81
MAP1LC3B-206ENST00000564844 OR56A4Q8NGH8 313 aa20.14■□□□□ 0.81
MAP1LC3B-206ENST00000564844 REXO4Q9GZR2 422 aaKnown RBP20.14■□□□□ 0.81
MAP1LC3B-206ENST00000564844 TMEFF2Q9UIK5 374 aaPredicted RBP20.14■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SPO11Q9Y5K1 396 aa20.14■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ELOVL7A1L3X0 281 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 LHX1P48742 406 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ST13P50502 369 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 STC1P52823 247 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 CES5AQ6NT32 575 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 LIMS2Q7Z4I7 341 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 DYNC2LI1Q8TCX1 351 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 RTP3Q9BQQ7 232 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 MUC13Q9H3R2 512 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 DDX28Q9NUL7 540 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 NYNRINQ9P2P1 1898 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 A0A096LPI6 279 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 RAD51BO15315 384 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 LRATO95237 230 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 CYP11A1P05108 521 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ALOX5P09917 674 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 C21orf33P30042 268 aaPredicted RBP20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 MVKQ03426 396 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 DDR2Q16832 855 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 CARD16Q5EG05 197 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 XKR7Q5GH72 579 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 OR4F6Q8NGB9 312 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 OR10T2Q8NGX3 314 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ARRDC2Q8TBH0 407 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 GIPC2Q8TF65 315 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 IGSF8Q969P0 613 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PSD2Q9BQI7 771 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 DCSTAMPQ9H295 470 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SLC25A37Q9NYZ2 338 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PKP3Q9Y446 797 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ZNF451Q9Y4E5 1061 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 GMPPBQ9Y5P6 360 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 TYW5A2RUC4 315 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 EFCAB9A8MZ26 197 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 FAM47E-STBD1D6RA91 191 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ASNA1O43681 348 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 RPS17P08708 135 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PRR35P0CG20 571 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ARPP19P56211 112 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 LRIT3Q3SXY7 679 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ATL1Q8WXF7 558 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 RHBDF1Q96CC6 855 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 CTRCQ99895 268 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SPON2Q9BUD6 331 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 APOL5Q9BWW9 433 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 BRINP2Q9C0B6 783 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 C14orf119Q9NWQ9 140 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PLXNA1Q9UIW2 1896 aa20.13■□□□□ 0.81
MAP1LC3B-206ENST00000564844 TNPO2O14787 897 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 SLC22A1O15245 554 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 FGF10O15520 208 aaPredicted RBP20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 KRT75O95678 551 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 BMPR1AP36894 532 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PWP1Q13610 501 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 FAM214AQ32MH5 1076 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ZRANB3Q5FWF4 1079 aa20.12■□□□□ 0.81
MAP1LC3B-206ENST00000564844 COQ5Q5HYK3 327 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms