RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 AP1M2Q9Y6Q5 423 aa13.81□□□□□ -0.2
COMMD4-211ENST00000564815 SPTAN1Q13813 2472 aaKnown RBP13.81□□□□□ -0.2
COMMD4-211ENST00000564815 MED13Q9UHV7 2174 aa13.81□□□□□ -0.2
COMMD4-211ENST00000564815 C2orf74A8MZ97 194 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 GAPDHSO14556 408 aaPredicted RBP13.8□□□□□ -0.2
COMMD4-211ENST00000564815 GPR39O43194 453 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 GSTM1P09488 218 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 ATP1B2P14415 290 aaPredicted RBP13.8□□□□□ -0.2
COMMD4-211ENST00000564815 RORAP35398 523 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 GSTM4Q03013 218 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 RPA4Q13156 261 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 ELOAQ14241 798 aaKnown RBP13.8□□□□□ -0.2
COMMD4-211ENST00000564815 SSPNQ14714 243 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 EIF2S3LQ2VIR3 472 aaKnown RBP13.8□□□□□ -0.2
COMMD4-211ENST00000564815 GPR33Q49SQ1 333 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 FBXO38Q6PIJ6 1188 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 RANBP10Q6VN20 620 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 SNX20Q7Z614 316 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 KATNAL2Q8IYT4 538 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 TM9SF4Q92544 642 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 RMDN2Q96LZ7 410 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 QKIQ96PU8 341 aaKnown RBP eCLIP13.8□□□□□ -0.2
COMMD4-211ENST00000564815 SMAD5Q99717 465 aaKnown RBP13.8□□□□□ -0.2
COMMD4-211ENST00000564815 FICDQ9BVA6 458 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 GBA3Q9H227 469 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 TFB2MQ9H5Q4 396 aaKnown RBP13.8□□□□□ -0.2
COMMD4-211ENST00000564815 ABHD10Q9NUJ1 306 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 PCMTD2Q9NV79 361 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 FEZ2Q9UHY8 353 aaPredicted RBP13.8□□□□□ -0.2
COMMD4-211ENST00000564815 FKBPLQ9UIM3 349 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 NOTCH2Q04721 2471 aa13.8□□□□□ -0.2
COMMD4-211ENST00000564815 TCP11X1B4DZS4 312 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 KDM1AO60341 852 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 ZNF189O75820 626 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-211ENST00000564815 IPO13O94829 963 aaKnown RBP13.79□□□□□ -0.2
COMMD4-211ENST00000564815 CTNNA2P26232 953 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 CA5AP35218 305 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 CETN2P41208 172 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 PRLHRP49683 370 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 PTPRCAPQ14761 206 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 NCF4Q15080 339 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 KYNUQ16719 465 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 VWA5B1Q5TIE3 1220 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 PRAMEF17Q5VTA0 474 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 MLIPQ5VWP3 458 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 LYPLAL1Q5VWZ2 237 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 DAAM2Q86T65 1068 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 AMIGO1Q86WK6 493 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 IQCKQ8N0W5 287 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 ZBTB2Q8N680 514 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 CLEC1AQ8NC01 280 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 OR1L3Q8NH93 324 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 HAUS1Q96CS2 278 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 ALS2CR12Q96Q35 445 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 LUC7LQ9NQ29 371 aaKnown RBP13.79□□□□□ -0.2
COMMD4-211ENST00000564815 TNRC6AQ8NDV7 1962 aaKnown RBP13.79□□□□□ -0.2
COMMD4-211ENST00000564815 SPTBP11277 2137 aa13.79□□□□□ -0.2
COMMD4-211ENST00000564815 hCG_1818297A0A087WSY0 165 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 AGAP14A8MT82 685 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 APOC4-APOC2K7ER74 178 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 ZNF749O43361 778 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 SEMA7AO75326 666 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 LCA5LO95447 670 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 APOC2P02655 101 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 RBL1P28749 1068 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 OTX2P32243 289 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 MAGEA1P43355 309 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 COPS2P61201 443 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 ABRQ12979 859 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 PTCHD3Q3KNS1 767 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 SLC6A19Q695T7 634 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 LCN10Q6JVE6 187 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 BBS12Q6ZW61 710 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 CNGA4Q8IV77 575 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 NXPE1Q8N323 547 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 RBMXL3Q8N7X1 1067 aaKnown RBP13.78□□□□□ -0.2
COMMD4-211ENST00000564815 TFGQ92734 400 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-211ENST00000564815 TCTN2Q96GX1 697 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 PPM1MQ96MI6 270 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 TRAPPC9Q96Q05 1148 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 NUDT9Q9BW91 350 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 PITPNM3Q9BZ71 974 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 COG4Q9H9E3 785 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 ZDHHC3Q9NYG2 299 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 RELNP78509 3460 aa13.78□□□□□ -0.2
COMMD4-211ENST00000564815 ENO4A6NNW6 628 aa13.77□□□□□ -0.21
COMMD4-211ENST00000564815 F8W8V4 182 aa13.77□□□□□ -0.21
COMMD4-211ENST00000564815 BTN3A3O00478 584 aa13.77□□□□□ -0.21
COMMD4-211ENST00000564815 BTN3A1O00481 513 aa13.77□□□□□ -0.21
COMMD4-211ENST00000564815 DDX3YO15523 660 aaKnown RBP13.77□□□□□ -0.21
COMMD4-211ENST00000564815 LDB2O43679 373 aa13.77□□□□□ -0.21
COMMD4-211ENST00000564815 OR2B3O76000 313 aa13.77□□□□□ -0.21
COMMD4-211ENST00000564815 CAPN1P07384 714 aa13.77□□□□□ -0.21
COMMD4-211ENST00000564815 ST6GAL1P15907 406 aa13.77□□□□□ -0.21
COMMD4-211ENST00000564815 FOLR3P41439 243 aa13.77□□□□□ -0.21
COMMD4-211ENST00000564815 LMAN1P49257 510 aa13.77□□□□□ -0.21
COMMD4-211ENST00000564815 HADHBP55084 474 aaKnown RBP13.77□□□□□ -0.21
COMMD4-211ENST00000564815 DCDP81605 110 aaKnown RBP13.77□□□□□ -0.21
COMMD4-211ENST00000564815 TMPRSS15P98073 1019 aa13.77□□□□□ -0.21
COMMD4-211ENST00000564815 XIAPP98170 497 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms