RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 SULT1C3Q6IMI6 304 aa11□□□□□ -0.65
SNX29-204ENST00000564791 C6orf89Q6UWU4 347 aa11□□□□□ -0.65
SNX29-204ENST00000564791 AMZ2Q86W34 360 aa11□□□□□ -0.65
SNX29-204ENST00000564791 WDR75Q8IWA0 830 aaKnown RBP11□□□□□ -0.65
SNX29-204ENST00000564791 TRPC4APQ8TEL6 797 aa11□□□□□ -0.65
SNX29-204ENST00000564791 UBTD2Q8WUN7 234 aa11□□□□□ -0.65
SNX29-204ENST00000564791 RHBDF1Q96CC6 855 aa11□□□□□ -0.65
SNX29-204ENST00000564791 BMFQ96LC9 184 aa11□□□□□ -0.65
SNX29-204ENST00000564791 TMEM79Q9BSE2 394 aa11□□□□□ -0.65
SNX29-204ENST00000564791 EML4Q9HC35 981 aaKnown RBP11□□□□□ -0.65
SNX29-204ENST00000564791 TNFRSF12AQ9NP84 129 aa11□□□□□ -0.65
SNX29-204ENST00000564791 ARL15Q9NXU5 204 aa11□□□□□ -0.65
SNX29-204ENST00000564791 KCNK4Q9NYG8 393 aa11□□□□□ -0.65
SNX29-204ENST00000564791 WWOXQ9NZC7 414 aa11□□□□□ -0.65
SNX29-204ENST00000564791 ZNHIT2Q9UHR6 403 aa11□□□□□ -0.65
SNX29-204ENST00000564791 PTBP2Q9UKA9 531 aaKnown RBP11□□□□□ -0.65
SNX29-204ENST00000564791 EPB41L3Q9Y2J2 1087 aaPredicted RBP11□□□□□ -0.65
SNX29-204ENST00000564791 SIT1Q9Y3P8 196 aa11□□□□□ -0.65
SNX29-204ENST00000564791 KRT87PA6NCN2 255 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 TMEM233B4DJY2 109 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 E2F3O00716 465 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 PPP6CO00743 305 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 ZNF195O14628 629 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 HOXC4P09017 264 aaPredicted RBP10.99□□□□□ -0.65
SNX29-204ENST00000564791 HSPA7P48741 367 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 RPIAP49247 311 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 PFN3P60673 137 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 CDKL1Q00532 357 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 PLOD1Q02809 727 aaPredicted RBP10.99□□□□□ -0.65
SNX29-204ENST00000564791 CLCQ05315 142 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 GALNT1Q10472 559 aaPredicted RBP10.99□□□□□ -0.65
SNX29-204ENST00000564791 NFATC4Q14934 902 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 PCBP2Q15366 365 aaKnown RBP eCLIP10.99□□□□□ -0.652e-6■■■■□ 23.9
SNX29-204ENST00000564791 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.99□□□□□ -0.65
SNX29-204ENST00000564791 TPRG1LQ5T0D9 272 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 FAM219BQ5XKK7 198 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 TMEM145Q8NBT3 493 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 NECAB3Q96P71 396 aaPredicted RBP10.99□□□□□ -0.65
SNX29-204ENST00000564791 PLCD4Q9BRC7 762 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 SIKE1Q9BRV8 207 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 TRIM54Q9BYV2 358 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 RMI1Q9H9A7 625 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 FGF22Q9HCT0 170 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 SEMA4BQ9NPR2 832 aaPredicted RBP10.99□□□□□ -0.65
SNX29-204ENST00000564791 MRPL40Q9NQ50 206 aaKnown RBP10.99□□□□□ -0.65
SNX29-204ENST00000564791 ABCF3Q9NUQ8 709 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 MOSPD1Q9UJG1 213 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 SUFUQ9UMX1 484 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 TNPO3Q9Y5L0 923 aaKnown RBP10.99□□□□□ -0.65
SNX29-204ENST00000564791 DNMT3AQ9Y6K1 912 aaPredicted RBP10.99□□□□□ -0.65
SNX29-204ENST00000564791 CEP192Q8TEP8 1941 aa10.99□□□□□ -0.65
SNX29-204ENST00000564791 PABPN1LA6NDY0 278 aaKnown RBP10.98□□□□□ -0.65
SNX29-204ENST00000564791 MATN2O00339 956 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 HGSO14964 777 aaPredicted RBP10.98□□□□□ -0.65
SNX29-204ENST00000564791 CATP04040 527 aaKnown RBP10.98□□□□□ -0.65
SNX29-204ENST00000564791 ANXA5P08758 320 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 HIST1H2AGP0C0S8 130 aaPredicted RBP10.98□□□□□ -0.65
SNX29-204ENST00000564791 ACP5P13686 325 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 HIST1H2ADP20671 130 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 MAPK9P45984 424 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 CCR3P51677 355 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 HK2P52789 917 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 LCP2Q13094 533 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 IFT88Q13099 833 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 RBBP7Q16576 425 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 PYCR3Q53H96 274 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 CDKL4Q5MAI5 379 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 VWA5B1Q5TIE3 1220 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 CHST15Q7LFX5 561 aaPredicted RBP10.98□□□□□ -0.65
SNX29-204ENST00000564791 GALNT13Q8IUC8 556 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 OR56A4Q8NGH8 313 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 MAPK15Q8TD08 544 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 MCOLN3Q8TDD5 553 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 AGAP11Q8TF27 550 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 BIRC7Q96CA5 298 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 PDXPQ96GD0 296 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 SCARF2Q96GP6 870 aaPredicted RBP10.98□□□□□ -0.65
SNX29-204ENST00000564791 HIST1H2AHQ96KK5 128 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 WDR92Q96MX6 357 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 FOPNLQ96NB1 174 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 HIST1H2AJQ99878 128 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 EBF4Q9BQW3 602 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 TIMM29Q9BSF4 260 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 H2AFJQ9BTM1 129 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 OR52A5Q9H2C5 316 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 DPEP2Q9H4A9 486 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 ZBTB26Q9HCK0 441 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 MID1IP1Q9NPA3 183 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 DNAJC28Q9NX36 388 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 FIS1Q9Y3D6 152 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 PLEKHM1Q9Y4G2 1056 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 HS3ST3A1Q9Y663 406 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 A0A1B0GTL3 188 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 PRSS38A1L453 326 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 PRAMEF26H0Y7S4 382 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 SCAMP1O15126 338 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 HDAC3O15379 428 aa10.98□□□□□ -0.65
SNX29-204ENST00000564791 CCNT2O60583 730 aaKnown RBP10.98□□□□□ -0.65
SNX29-204ENST00000564791 PDGFBP01127 241 aaPredicted RBP10.98□□□□□ -0.65
SNX29-204ENST00000564791 MAP4P27816 1152 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms