RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 SERTAD3Q9UJW9 196 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 UBR5O95071 2799 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 CDC14CA4D256 554 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 MROH6A6NGR9 719 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 LIN7AO14910 233 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 KDM1AO60341 852 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 METTL18O95568 372 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 HBQ1P09105 142 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 POLR2CP19387 275 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 PRDX3P30048 256 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 OLIG2Q13516 323 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 SEMA5AQ13591 1074 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 AADACL2Q6P093 401 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 AMIGO1Q86WK6 493 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 ACRBPQ8NEB7 543 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 TFGQ92734 400 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 HES6Q96HZ4 224 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 DNAJC1Q96KC8 554 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 FAM118BQ9BPY3 351 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 DPH2Q9BQC3 489 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 PITPNM3Q9BZ71 974 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 TRIM4Q9C037 500 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 CHRNA10Q9GZZ6 450 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 RBSNQ9H1K0 784 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 ACTL8Q9H568 366 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 FAM96AQ9H5X1 160 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 SOHLH2Q9NX45 425 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 POLG2Q9UHN1 485 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 RIMKLBQ9ULI2 386 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 MAN2B2Q9Y2E5 1009 aa11.84□□□□□ -0.51
GTF3C1-204ENST00000564664 SLC9B1P1A6NJY1 282 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 C2orf74A8MZ97 194 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 PYCARD-AS1I3L0S3 204 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 MEN1O00255 615 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 DDX3YO15523 660 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 FTH1P02794 183 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 FURINP09958 794 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 TPH1P17752 444 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 PPARGP37231 505 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 FDFT1P37268 417 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 PREPP48147 710 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 FOXK1P85037 733 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 BOP1Q14137 746 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 GPR19Q15760 415 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 PLEKHS1Q5SXH7 462 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 ATP1A1-AS1Q5TC04 95 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 DUS1LQ6P1R4 473 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 PACS1Q6VY07 963 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 CERS6Q6ZMG9 384 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 NLRP9Q7RTR0 991 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 DSELQ8IZU8 1212 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 LILRA3Q8N6C8 439 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 TEX19Q8NA77 164 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 PEX13Q92968 403 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 MR1Q95460 341 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.83□□□□□ -0.521e-9■■■■■ 31.4
GTF3C1-204ENST00000564664 SGSM3Q96HU1 749 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 TMEM121Q9BTD3 319 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 NLNQ9BYT8 704 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 EPN3Q9H201 632 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 FAM8A1Q9UBU6 413 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 TLK1Q9UKI8 766 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 PCDHGB7Q9Y5F8 929 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 NBASA2RRP1 2371 aa11.83□□□□□ -0.52
GTF3C1-204ENST00000564664 HEATR9A2RTY3 570 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 GSAPA4D1B5 854 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 SUN1O94901 812 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 CD63P08962 238 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 OR56A5P0C7T3 313 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 SHMT2P34897 504 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 CDKN1CP49918 316 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 CDH17Q12864 832 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 POU6F1Q14863 301 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 FAM199XQ6PEV8 388 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 ASB18Q6ZVZ8 466 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 HOOK3Q86VS8 718 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 HPS6Q86YV9 775 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 TBC1D21Q8IYX1 336 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 CLDN19Q8N6F1 224 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 PHC3Q8NDX5 983 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 OR52E1Q8NGJ3 308 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 TCTN2Q96GX1 697 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 C17orf62Q9BQA9 187 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 AKIRIN1Q9H9L7 192 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 SMARCAL1Q9NZC9 954 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 OR6C2Q9NZP2 312 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 TP53TG5Q9Y2B4 290 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 PCDHGA9Q9Y5G4 932 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 AP1M2Q9Y6Q5 423 aa11.82□□□□□ -0.52
GTF3C1-204ENST00000564664 BTN3A3O00478 584 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 BTN3A1O00481 513 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 CCL22O00626 93 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 CYP2A7P20853 494 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 AGXTP21549 392 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 ADRA1DP25100 572 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 MSNP26038 577 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 ACADLP28330 430 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 PDHA2P29803 388 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 CDC25BP30305 580 aa11.81□□□□□ -0.52
GTF3C1-204ENST00000564664 RORAP35398 523 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms