RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.59□□□□□ -0.07
SPG7-210ENST00000564409 ZNF501Q96CX3 271 aaPredicted RBP14.59□□□□□ -0.07
SPG7-210ENST00000564409 FERD3LQ96RJ6 166 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 TTC1Q99614 292 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 TMEM121Q9BTD3 319 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 SOHLH2Q9NX45 425 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 RIMKLBQ9ULI2 386 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 GOLGA6L6A8MZA4 724 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 RFPL1O75677 317 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 TIAF1O95411 115 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 FTH1P02794 183 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 POLR2CP19387 275 aaPredicted RBP14.58□□□□□ -0.08
SPG7-210ENST00000564409 CDH3P22223 829 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 CDC25BP30305 580 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 FDFT1P37268 417 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 CDH17Q12864 832 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 BOP1Q14137 746 aaKnown RBP14.58□□□□□ -0.08
SPG7-210ENST00000564409 POU6F1Q14863 301 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 UGT8Q16880 541 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 PTRH1Q86Y79 214 aaKnown RBP14.58□□□□□ -0.08
SPG7-210ENST00000564409 CPT1BQ92523 772 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 TFGQ92734 400 aaPredicted RBP14.58□□□□□ -0.08
SPG7-210ENST00000564409 PITPNM3Q9BZ71 974 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 TSGA10Q9BZW7 698 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 TRIM4Q9C037 500 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 ACTL8Q9H568 366 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 POLG2Q9UHN1 485 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 MAN2B2Q9Y2E5 1009 aa14.58□□□□□ -0.08
SPG7-210ENST00000564409 CDC14CA4D256 554 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 C2orf74A8MZ97 194 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 CCL22O00626 93 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 KDM1AO60341 852 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 FTCDO95954 541 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 NTRK1P04629 796 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 TPH1P17752 444 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 PRDX3P30048 256 aaKnown RBP14.57□□□□□ -0.08
SPG7-210ENST00000564409 PPARGP37231 505 aaPredicted RBP14.57□□□□□ -0.08
SPG7-210ENST00000564409 KLRB1Q12918 225 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 GPR19Q15760 415 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 ATP1A1-AS1Q5TC04 95 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 SEL1L2Q5TEA6 688 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 IZUMO3Q5VZ72 239 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 CERS6Q6ZMG9 384 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 NLRP9Q7RTR0 991 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 AMIGO1Q86WK6 493 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 LILRA3Q8N6C8 439 aaPredicted RBP14.57□□□□□ -0.08
SPG7-210ENST00000564409 PEX13Q92968 403 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 DPH2Q9BQC3 489 aaPredicted RBP14.57□□□□□ -0.08
SPG7-210ENST00000564409 CHRNA10Q9GZZ6 450 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 ZNF71Q9NQZ8 489 aaPredicted RBP14.57□□□□□ -0.08
SPG7-210ENST00000564409 SERTAD3Q9UJW9 196 aa14.57□□□□□ -0.08
SPG7-210ENST00000564409 PACSIN2Q9UNF0 486 aaPredicted RBP14.57□□□□□ -0.08
SPG7-210ENST00000564409 FARSAQ9Y285 508 aaKnown RBP14.57□□□□□ -0.08
SPG7-210ENST00000564409 R3HDM2Q9Y2K5 976 aaKnown RBP14.57□□□□□ -0.08
SPG7-210ENST00000564409 HEATR9A2RTY3 570 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 GSAPA4D1B5 854 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 SLC9B1P1A6NJY1 282 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 PYCARD-AS1I3L0S3 204 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 SUN1O94901 812 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 HBQ1P09105 142 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 RAB40ALP0C0E4 278 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 MSNP26038 577 aaKnown RBP14.56□□□□□ -0.08
SPG7-210ENST00000564409 SHMT2P34897 504 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 PREPP48147 710 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 CDKN1CP49918 316 aaPredicted RBP14.56□□□□□ -0.08
SPG7-210ENST00000564409 GDF10P55107 478 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 DBN1Q16643 649 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 PIANPQ8IYJ0 282 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 CLDN19Q8N6F1 224 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 DNAAF3Q8N9W5 541 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 OR52E1Q8NGJ3 308 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 NAT14Q8WUY8 206 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 MR1Q95460 341 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 SGSM3Q96HU1 749 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 RANBP9Q96S59 729 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 EPN3Q9H201 632 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 SMARCAL1Q9NZC9 954 aa14.56□□□□□ -0.08
SPG7-210ENST00000564409 MEN1O00255 615 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 BTN3A1O00481 513 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 KRT86O43790 486 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 FURINP09958 794 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 OR56A5P0C7T3 313 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 PDHA2P29803 388 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 GPS2Q13227 327 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 SEMA5AQ13591 1074 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 OASLQ15646 514 aaKnown RBP14.55□□□□□ -0.08
SPG7-210ENST00000564409 C4orf22Q6V702 233 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 HOOK3Q86VS8 718 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 TBC1D21Q8IYX1 336 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 DSELQ8IZU8 1212 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 DESI2Q9BSY9 194 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 TSSK1BQ9BXA7 367 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 TLR10Q9BXR5 811 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 NLNQ9BYT8 704 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 OR6C2Q9NZP2 312 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 TP53TG5Q9Y2B4 290 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 NBASA2RRP1 2371 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 BSNQ9UPA5 3926 aa14.55□□□□□ -0.08
SPG7-210ENST00000564409 TCRBV7S2A1N4TA0A589 114 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 E7EVH7 732 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms