RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 NFE2L1Q14494 772 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 LAIR1Q6GTX8 287 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 LAYNQ6UX15 382 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 XKR5Q6UX68 686 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 CYHR1Q6ZMK1 362 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 RABEPKQ7Z6M1 372 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 HID1Q8IV36 788 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 SPNS2Q8IVW8 549 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 SLC22A15Q8IZD6 547 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 SPATA6LQ8N4H0 392 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 TCP10LQ8TDR4 215 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 ZNF473Q8WTR7 871 aaKnown RBP12.64□□□□□ -0.39
SPG7-209ENST00000564047 LOXL4Q96JB6 756 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 SELENOSQ9BQE4 189 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 TFB2MQ9H5Q4 396 aaKnown RBP12.64□□□□□ -0.39
SPG7-209ENST00000564047 KLC4Q9NSK0 619 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 TMEM74BQ9NUR3 256 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 ZNF358Q9NW07 568 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 TMEM216Q9P0N5 145 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 FAM8A1Q9UBU6 413 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 ACSL5Q9ULC5 683 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 RRP15Q9Y3B9 282 aaKnown RBP12.64□□□□□ -0.39
SPG7-209ENST00000564047 H3BM21 787 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 CSF2P04141 144 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 RETP07949 1114 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 RBP1P09455 135 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 NME1P15531 152 aaKnown RBP12.63□□□□□ -0.39
SPG7-209ENST00000564047 IDSP22304 550 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 RPA3P35244 121 aaPredicted RBP12.63□□□□□ -0.39
SPG7-209ENST00000564047 MPP2Q14168 576 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 CCDC153Q494R4 210 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 N4BP2L1Q5TBK1 243 aaPredicted RBP12.63□□□□□ -0.39
SPG7-209ENST00000564047 TTC19Q6DKK2 380 aaPredicted RBP12.63□□□□□ -0.39
SPG7-209ENST00000564047 LVRNQ6Q4G3 990 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 PRR23BQ6ZRT6 265 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 FAM83HQ6ZRV2 1179 aaPredicted RBP12.63□□□□□ -0.39
SPG7-209ENST00000564047 PIWIL4Q7Z3Z4 852 aaKnown RBP12.63□□□□□ -0.39
SPG7-209ENST00000564047 ISCA2Q86U28 154 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 VRK3Q8IV63 474 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 PHACTR4Q8IZ21 702 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 FSTL5Q8N475 847 aaPredicted RBP12.63□□□□□ -0.39
SPG7-209ENST00000564047 LILRA3Q8N6C8 439 aaPredicted RBP12.63□□□□□ -0.39
SPG7-209ENST00000564047 RHEBL1Q8TAI7 183 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 CEP76Q8TAP6 659 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 PIGKQ92643 395 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 KIAA1191Q96A73 305 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 CCT8L2Q96SF2 557 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 TMEM168Q9H0V1 697 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 OR52A5Q9H2C5 316 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 ERVMER34-1Q9H9K5 563 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 NKIRAS1Q9NYS0 192 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 KLF15Q9UIH9 416 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 EMCNQ9ULC0 261 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 DNAJC16Q9Y2G8 782 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 PLEKHM1Q9Y4G2 1056 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 DOCK9Q9BZ29 2069 aa12.63□□□□□ -0.39
SPG7-209ENST00000564047 A0A1B0GVT2 93 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 BTN3A1O00481 513 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 SLC16A5O15375 505 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 ZBTB14O43829 449 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 FOXD2O60548 495 aaPredicted RBP12.62□□□□□ -0.39
SPG7-209ENST00000564047 PLIN3O60664 434 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 MATN4O95460 622 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 PROCP04070 461 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 JUNDP17535 347 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 TFEBP19484 476 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 PDHA2P29803 388 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 CTSKP43235 329 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 ETV4P43268 484 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 PREPP48147 710 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 GLRBP48167 497 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 CTBSQ01459 385 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 ILF3Q12906 894 aaKnown RBP eCLIP12.62□□□□□ -0.393e-6■■■□□ 18.6
SPG7-209ENST00000564047 SEPT7Q16181 437 aaKnown RBP12.62□□□□□ -0.39
SPG7-209ENST00000564047 LPAL2Q16609 132 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 DUOXA1Q1HG43 343 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 ZNF542PQ5EBM4 170 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 TECRLQ5HYJ1 363 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 C16orf46Q6P387 395 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 PRR23CQ6ZRP0 262 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 YTHDF3Q7Z739 585 aaKnown RBP12.62□□□□□ -0.39
SPG7-209ENST00000564047 RASGRP3Q8IV61 690 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 TMEM151AQ8N4L1 468 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 STAG3L4Q8TBR4 150 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 GPBAR1Q8TDU6 330 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 DENND1AQ8TEH3 1009 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 PTERQ96BW5 349 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 SCYL1Q96KG9 808 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 FAM111AQ96PZ2 611 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 MRPL57Q9BQC6 102 aaKnown RBP12.62□□□□□ -0.39
SPG7-209ENST00000564047 GSDMCQ9BYG8 508 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 UNKQ9C0B0 810 aaKnown RBP12.62□□□□□ -0.39
SPG7-209ENST00000564047 MRPL46Q9H2W6 279 aaKnown RBP12.62□□□□□ -0.39
SPG7-209ENST00000564047 ALG9Q9H6U8 611 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 SEMA4GQ9NTN9 838 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 DNAJC28Q9NX36 388 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 SLC17A7Q9P2U7 560 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 APOBEC3BQ9UH17 382 aaKnown RBP12.62□□□□□ -0.39
SPG7-209ENST00000564047 MID2Q9UJV3 735 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 IKZF3Q9UKT9 509 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms