RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 MS4A3Q96HJ5 214 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 TMEM74Q96NL1 305 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 SLC46A1Q96NT5 459 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 DPYSL5Q9BPU6 564 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 NAT9Q9BTE0 207 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 LRRC1Q9BTT6 524 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 TWSG1Q9GZX9 223 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 EPB41L1Q9H4G0 881 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 STN1Q9H668 368 aaKnown RBP8.33□□□□□ -1.08
UBR1-204ENST00000563239 CCDC86Q9H6F5 360 aaKnown RBP8.33□□□□□ -1.08
UBR1-204ENST00000563239 KIR3DX1Q9H7L2 352 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 POLR1BQ9H9Y6 1135 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 FBXO6Q9NRD1 293 aaPredicted RBP8.33□□□□□ -1.08
UBR1-204ENST00000563239 LATS2Q9NRM7 1088 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 IARS2Q9NSE4 1012 aaKnown RBP8.33□□□□□ -1.08
UBR1-204ENST00000563239 INTS10Q9NVR2 710 aaKnown RBP8.33□□□□□ -1.08
UBR1-204ENST00000563239 SLC17A6Q9P2U8 582 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 GNPTGQ9UJJ9 305 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 FBXO5Q9UKT4 447 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 CHMP2BQ9UQN3 213 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 CRYL1Q9Y2S2 319 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 PCDHGA8Q9Y5G5 932 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 KIF26BQ2KJY2 2108 aa8.33□□□□□ -1.08
UBR1-204ENST00000563239 MN1Q10571 1320 aaPredicted RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 UBA6A0AVT1 1052 aaPredicted RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 TMEM8BA6NDV4 472 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 TMX2-CTNND1H3BSU7 103 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 KIF2AO00139 706 aaPredicted RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 AGRPO00253 132 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 ZW10O43264 779 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 TLX3O43711 291 aaPredicted RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 KIF1CO43896 1103 aaKnown RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 HAUS5O94927 633 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 ESR1P03372 595 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 FGF3P11487 239 aaPredicted RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 CCL4P13236 92 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 PKMP14618 531 aaKnown RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 CAPZBP47756 277 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 LEPRP48357 1165 aaKnown RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 CLCN7P51798 805 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 CSE1LP55060 971 aaKnown RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 PDIA2Q13087 525 aaKnown RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 TRA2AQ13595 282 aaKnown RBP eCLIP8.32□□□□□ -1.08
UBR1-204ENST00000563239 THOC5Q13769 683 aaKnown RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 FRG1Q14331 258 aaKnown RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 PHF19Q5T6S3 580 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 TEDDM1Q5T9Z0 273 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 RNF187Q5TA31 235 aaPredicted RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 PTRHD1Q6GMV3 140 aaKnown RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 CNSTQ6PJW8 725 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 RAB11FIP2Q7L804 512 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 KCNMB4Q86W47 210 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 PROSER1Q86XN7 944 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 ANKMY2Q8IV38 441 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 CNTN4Q8IWV2 1026 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 LMNTD2Q8IXW0 634 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 FBXO39Q8N4B4 442 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 BMPERQ8N8U9 685 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 C2CD4AQ8NCU7 369 aaPredicted RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 BBOF1Q8ND07 529 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 FBXO36Q8NEA4 188 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 OR5AR1Q8NGP9 310 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 GIMAP7Q8NHV1 300 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 TFGQ92734 400 aaPredicted RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 CFAP36Q96G28 342 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 AHCYL2Q96HN2 611 aaKnown RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 FERD3LQ96RJ6 166 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 SLC30A3Q99726 388 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 RAB33BQ9H082 229 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 MVB12BQ9H7P6 319 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 MOCS1Q9NZB8 636 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 EPHA6Q9UF33 1036 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 ZC3H7BQ9UGR2 993 aaKnown RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 DMGDHQ9UI17 866 aaKnown RBP8.32□□□□□ -1.08
UBR1-204ENST00000563239 LOXL2Q9Y4K0 774 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 HEBP2Q9Y5Z4 205 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 AK5Q9Y6K8 562 aa8.32□□□□□ -1.08
UBR1-204ENST00000563239 APC2O95996 2303 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 ESYT3A0FGR9 886 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 OR5K3A6NET4 321 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 A8MU76 341 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 CDRT15L2A8MXV6 281 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 IFRD1O00458 451 aaPredicted RBP8.31□□□□□ -1.08
UBR1-204ENST00000563239 BTN3A3O00478 584 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 PLD2O14939 933 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 HGSO14964 777 aaPredicted RBP8.31□□□□□ -1.08
UBR1-204ENST00000563239 CAPN5O15484 640 aaPredicted RBP8.31□□□□□ -1.08
UBR1-204ENST00000563239 TNFSF15O95150 251 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 C1QAP02745 245 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 AHSGP02765 367 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 AMD1P17707 334 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 ITIH1P19827 911 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 CARSP49589 748 aaKnown RBP8.31□□□□□ -1.08
UBR1-204ENST00000563239 PLTPP55058 493 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 PLOD1Q02809 727 aaPredicted RBP8.31□□□□□ -1.08
UBR1-204ENST00000563239 HSPA14Q0VDF9 509 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 PRKG2Q13237 762 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 EIF3IQ13347 325 aaKnown RBP8.31□□□□□ -1.08
UBR1-204ENST00000563239 TUBB2AQ13885 445 aa8.31□□□□□ -1.08
UBR1-204ENST00000563239 GRB7Q14451 532 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms