RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	IL25	Q9H293	177 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	THAP9	Q9H5L6	903 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	MID1IP1	Q9NPA3	183 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	EIF2B3	Q9NR50	452 aa	Known RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	SERINC1	Q9NRX5	453 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	RNF146	Q9NTX7	359 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	DECR2	Q9NUI1	292 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	KIAA1456	Q9P272	454 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	CACNG4	Q9UBN1	327 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	CCL27	Q9Y4X3	112 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	CLDN16	Q9Y5I7	305 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	TRBV5-7	A0A0A0MS05	114 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431		A0A1W2PPC1	479 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431		A8MXE2	369 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	EIF3CL	B5ME19	914 aa	Known RBP	4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431		F8VZ95	297 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	STMND1	H3BQB6	276 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	WDR46	O15213	610 aa	Known RBP	4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	ATP2C2	O75185	946 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	OLFM2	O95897	454 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	PNP	P00491	289 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	CYP1A2	P05177	515 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	HSPD1	P10809	573 aa	Known RBP	4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	PCNA	P12004	261 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	LAMP2	P13473	410 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	CCL5	P13501	91 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	NFKBIA	P25963	317 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	ADSS	P30520	456 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	TNFSF8	P32971	234 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	ARL3	P36405	182 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	HSD17B2	P37059	387 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	THPO	P40225	353 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	GPR12	P47775	334 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	ME1	P48163	572 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	NOV	P48745	357 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	GNAQ	P50148	359 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	HDAC4	P56524	1084 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	SARNP	P82979	210 aa	Known RBP	4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	MC1R	Q01726	317 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	GOLGA8DP	Q0D2H9	430 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	LRMP	Q12912	555 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	PTP4A2	Q12974	167 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	COASY	Q13057	564 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	CBX3	Q13185	183 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	ITGAD	Q13349	1161 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	MXD4	Q14582	209 aa	Predicted RBP	4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	LASP1	Q14847	261 aa	Known RBP	4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	ALX1	Q15699	326 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	INPP5J	Q15735	1006 aa	Predicted RBP	4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	RPE65	Q16518	533 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	MAJIN	Q3KP22	176 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	XKR9	Q5GH70	373 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	LCE1A	Q5T7P2	110 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	PM20D1	Q6GTS8	502 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	NCAPH2	Q6IBW4	605 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	DEF8	Q6ZN54	512 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	GSTA5	Q7RTV2	222 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	GPR142	Q7Z601	462 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	TBC1D10C	Q8IV04	446 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	TMEM199	Q8N511	208 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431		Q8NFD4	153 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	GPRC5A	Q8NFJ5	357 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	RAET1E	Q8TD07	263 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	SEPT1	Q8WYJ6	367 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	TRIB2	Q92519	343 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZNF653	Q96CK0	615 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZFYVE19	Q96K21	471 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	BBS4	Q96RK4	519 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	FUT8	Q9BYC5	575 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	SLC29A3	Q9BZD2	475 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	ACPT	Q9BZG2	426 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	NACAP1	Q9BZK3	213 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	TRIM7	Q9C029	511 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	B3GNT4	Q9C0J1	378 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	NAPB	Q9H115	298 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	EHD1	Q9H4M9	534 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	SH2D4A	Q9H788	454 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	CRLF2	Q9HC73	371 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	SPAG4	Q9NPE6	437 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	C20orf141	Q9NUB4	165 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	TUBA8	Q9NY65	449 aa	Predicted RBP	4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	IL20	Q9NYY1	176 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	NYAP2	Q9P242	653 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	IL19	Q9UHD0	177 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	FAM153A	Q9UHL3	310 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	EXOC7	Q9UPT5	735 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	FAM96B	Q9Y3D0	163 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	CCDC171	Q6TFL3	1326 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZMYM2	Q9UBW7	1377 aa		4.09	□□□□□ -1.75
LRRC28-222	ENST00000561431	COL11A1	P12107	1806 aa	Predicted RBP	4.09	□□□□□ -1.76
LRRC28-222	ENST00000561431	WDR91	A4D1P6	747 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	LRRC72	A6NJI9	287 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	LRRC37A2	A6NM11	1700 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	LRRC53	A6NM62	1247 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431		A6NNC1	897 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	TMCO5B	A8MYB1	307 aa		4.08	□□□□□ -1.76

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