RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 RMDN2Q96LZ7 410 aa10.04□□□□□ -0.8
LRRC28-221ENST00000561276 FERD3LQ96RJ6 166 aa10.04□□□□□ -0.8
LRRC28-221ENST00000561276 CDC6Q99741 560 aa10.04□□□□□ -0.8
LRRC28-221ENST00000561276 DHRS4Q9BTZ2 278 aa10.04□□□□□ -0.8
LRRC28-221ENST00000561276 SLC32A1Q9H598 525 aa10.04□□□□□ -0.8
LRRC28-221ENST00000561276 SLC40A1Q9NP59 571 aa10.04□□□□□ -0.8
LRRC28-221ENST00000561276 IMP3Q9NV31 184 aaKnown RBP10.04□□□□□ -0.8
LRRC28-221ENST00000561276 FTSJ1Q9UET6 329 aa10.04□□□□□ -0.8
LRRC28-221ENST00000561276 FETUBQ9UGM5 382 aa10.04□□□□□ -0.8
LRRC28-221ENST00000561276 SLC24A2Q9UI40 661 aa10.04□□□□□ -0.8
LRRC28-221ENST00000561276 TSR3Q9UJK0 312 aaKnown RBP10.04□□□□□ -0.8
LRRC28-221ENST00000561276 ZNF180Q9UJW8 692 aa10.04□□□□□ -0.8
LRRC28-221ENST00000561276 CDV3Q9UKY7 258 aaKnown RBP10.04□□□□□ -0.8
LRRC28-221ENST00000561276 U3KQA8 63 aa10.04□□□□□ -0.8
LRRC28-221ENST00000561276 ARID1BQ8NFD5 2236 aaPredicted RBP10.04□□□□□ -0.8
LRRC28-221ENST00000561276 ZNF292O60281 2723 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 EME2A4GXA9 379 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-221ENST00000561276 RHPN2P1A8MT19 583 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 TNFSF14O43557 240 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 NUDT21O43809 227 aaKnown RBP10.03□□□□□ -0.8
LRRC28-221ENST00000561276 KRT38O76015 456 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 MATN4O95460 622 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 NUDT17P0C025 328 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 CBSLP0DN79 551 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 MTHFD1P11586 935 aaKnown RBP10.03□□□□□ -0.8
LRRC28-221ENST00000561276 STMN1P16949 149 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 CSRP1P21291 193 aaKnown RBP10.03□□□□□ -0.8
LRRC28-221ENST00000561276 SDHBP21912 280 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 ACP1P24666 158 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 CNTFP26441 200 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 CBSP35520 551 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 FASLGP48023 281 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 IL2P60568 153 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 RAB10P61026 200 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 HHEXQ03014 270 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 BIRC2Q13490 618 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 BMPR2Q13873 1038 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 KRT33BQ14525 404 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 ZNF460Q14592 562 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-221ENST00000561276 LGSNQ5TDP6 509 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 GUSBP11Q6P575 273 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 TMEM207Q6UWW9 146 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 CYHR1Q6ZMK1 362 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 NEK10Q6ZWH5 1172 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 PDZD3Q86UT5 571 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 TRIM48Q8IWZ4 208 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 CPNE9Q8IYJ1 553 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 SKA2Q8WVK7 121 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-221ENST00000561276 HNRNPLLQ8WVV9 542 aaKnown RBP10.03□□□□□ -0.8
LRRC28-221ENST00000561276 TSPAN17Q96FV3 270 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 SYTL2Q9HCH5 934 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 GPAMQ9HCL2 828 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 EVA1BQ9NVM1 165 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 TBK1Q9UHD2 729 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 ASF1AQ9Y294 204 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 HEBP2Q9Y5Z4 205 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 NFS1Q9Y697 457 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 RNF215Q9Y6U7 377 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 COLEC10Q9Y6Z7 277 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 GPR179Q6PRD1 2367 aa10.03□□□□□ -0.8
LRRC28-221ENST00000561276 CABIN1Q9Y6J0 2220 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 TLDC2A0PJX2 215 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 EIF3FO00303 357 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-221ENST00000561276 PHGDHO43175 533 aaKnown RBP10.02□□□□□ -0.81
LRRC28-221ENST00000561276 KRT37O76014 449 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 SNRPAP09012 282 aaKnown RBP10.02□□□□□ -0.81
LRRC28-221ENST00000561276 MPC1LP0DKB6 136 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 CEACAM1P13688 526 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 ENO3P13929 434 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-221ENST00000561276 PNLIPP16233 465 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 TYK2P29597 1187 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 ALDH4A1P30038 563 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 ATP5DP30049 168 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 SLCO1A2P46721 670 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 RGS4P49798 205 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 UBE2IP63279 158 aaKnown RBP10.02□□□□□ -0.81
LRRC28-221ENST00000561276 IFFO1Q0D2I5 559 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 PRKG2Q13237 762 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 PERM1Q5SV97 790 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 BEND6Q5SZJ8 279 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-221ENST00000561276 DUS1LQ6P1R4 473 aaKnown RBP10.02□□□□□ -0.81
LRRC28-221ENST00000561276 UNC5DQ6UXZ4 953 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 RAPH1Q70E73 1250 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 TAOK1Q7L7X3 1001 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 EFL1Q7Z2Z2 1120 aaKnown RBP10.02□□□□□ -0.81
LRRC28-221ENST00000561276 CMC1Q7Z7K0 106 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 GLRX5Q86SX6 157 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 ZNF761Q86XN6 746 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-221ENST00000561276 TBC1D21Q8IYX1 336 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 IQCKQ8N0W5 287 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 NKAPQ8N5F7 415 aaKnown RBP10.02□□□□□ -0.81
LRRC28-221ENST00000561276 AVL9Q8NBF6 648 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 OR5AR1Q8NGP9 310 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 IFI44Q8TCB0 444 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 EPS8L3Q8TE67 593 aaKnown RBP10.02□□□□□ -0.81
LRRC28-221ENST00000561276 ANKRD49Q8WVL7 239 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 ZFPM2Q8WW38 1151 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 SH3KBP1Q96B97 665 aa10.02□□□□□ -0.81
LRRC28-221ENST00000561276 PDLIM5Q96HC4 596 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms