RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CD151P48509 253 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 PGGT1BP53609 377 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 HSPA14Q0VDF9 509 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 STEAP4Q687X5 459 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 PTRHD1Q6GMV3 140 aaKnown RBP13.53□□□□□ -0.24
TPM1-230ENST00000561266 MRNIPQ6NTE8 343 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 CNSTQ6PJW8 725 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 IGF2-ASQ6U949 168 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 ZDHHC24Q6UX98 284 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 FAM92BQ6ZTR7 304 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 KCNMB4Q86W47 210 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 RBM12BQ8IXT5 1001 aaKnown RBP13.53□□□□□ -0.24
TPM1-230ENST00000561266 BMPERQ8N8U9 685 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 AVL9Q8NBF6 648 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.53□□□□□ -0.24
TPM1-230ENST00000561266 NOA1Q8NC60 698 aaKnown RBP13.53□□□□□ -0.24
TPM1-230ENST00000561266 OR4E2Q8NGC2 313 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 OR52E1Q8NGJ3 308 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 USP7Q93009 1102 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 CFAP36Q96G28 342 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 C9orf72Q96LT7 481 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 TCF12Q99081 682 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 TTC1Q99614 292 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 LRRC1Q9BTT6 524 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 HGH1Q9BTY7 390 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 STRADBQ9C0K7 418 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 VPS37BQ9H9H4 285 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 FOXJ2Q9P0K8 574 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 CIDEBQ9UHD4 219 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 FBXO5Q9UKT4 447 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 PLAGL1Q9UM63 463 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 RUVBL2Q9Y230 463 aaKnown RBP13.53□□□□□ -0.24
TPM1-230ENST00000561266 MRFAP1Q9Y605 127 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 NFS1Q9Y697 457 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 CACNA1BQ00975 2339 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 OR6C74A6NCV1 312 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 TMX2-CTNND1H3BSU7 103 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 QSOX1O00391 747 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 PRAMEF10O60809 474 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 SLCO2B1O94956 709 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 GSTM1P09488 218 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 PAMP19021 973 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 ITPKBP27987 946 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 SLC5A2P31639 672 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 KPNA2P52292 529 aaKnown RBP13.52□□□□□ -0.25
TPM1-230ENST00000561266 MAPK10P53779 464 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 GSTM4Q03013 218 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 ABRQ12979 859 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 PDIA2Q13087 525 aaKnown RBP13.52□□□□□ -0.25
TPM1-230ENST00000561266 CBLBQ13191 982 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 TRA2AQ13595 282 aaKnown RBP eCLIP13.52□□□□□ -0.25
TPM1-230ENST00000561266 THOC5Q13769 683 aaKnown RBP13.52□□□□□ -0.25
TPM1-230ENST00000561266 GRB7Q14451 532 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 GBX1Q14549 363 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 HIF1AQ16665 826 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 DNAJC21Q5F1R6 531 aaKnown RBP13.52□□□□□ -0.25
TPM1-230ENST00000561266 SDCCAG8Q86SQ7 713 aaPredicted RBP13.52□□□□□ -0.25
TPM1-230ENST00000561266 CLEC14AQ86T13 490 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 SLC22A15Q8IZD6 547 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 GIMAP7Q8NHV1 300 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 CRELD1Q96HD1 420 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 NAF1Q96HR8 494 aaKnown RBP13.52□□□□□ -0.25
TPM1-230ENST00000561266 DPYSL5Q9BPU6 564 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 APMAPQ9HDC9 416 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 WHRNQ9P202 907 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 EPHA6Q9UF33 1036 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 GNPTGQ9UJJ9 305 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 TSR3Q9UJK0 312 aaKnown RBP13.52□□□□□ -0.25
TPM1-230ENST00000561266 ICKQ9UPZ9 632 aa13.52□□□□□ -0.25
TPM1-230ENST00000561266 DSPP15924 2871 aaKnown RBP13.52□□□□□ -0.25
TPM1-230ENST00000561266 IGHV5-51A0A0C4DH38 117 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 ESYT3A0FGR9 886 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 OR5K3A6NET4 321 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 EFCAB7A8K855 629 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 BTN3A1O00481 513 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 HGSO14964 777 aaPredicted RBP13.51□□□□□ -0.25
TPM1-230ENST00000561266 ZW10O43264 779 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 PIAS1O75925 651 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 PKMP14618 531 aaKnown RBP13.51□□□□□ -0.25
TPM1-230ENST00000561266 POLR2CP19387 275 aaPredicted RBP13.51□□□□□ -0.25
TPM1-230ENST00000561266 PPARGP37231 505 aaPredicted RBP13.51□□□□□ -0.25
TPM1-230ENST00000561266 EIF2S3P41091 472 aaKnown RBP13.51□□□□□ -0.25
TPM1-230ENST00000561266 CARSP49589 748 aaKnown RBP13.51□□□□□ -0.25
TPM1-230ENST00000561266 SEPHS1P49903 392 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 CLCN7P51798 805 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 ADARP55265 1226 aaKnown RBP13.51□□□□□ -0.25
TPM1-230ENST00000561266 ARL4CP56559 192 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 SH3BP2P78314 561 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 PLCL1Q15111 1095 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 CCSMST1Q4G0I0 132 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 SYTL3Q4VX76 610 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 ACSBG2Q5FVE4 666 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 SPANXN3Q5MJ09 141 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 RBM20Q5T481 1227 aaKnown RBP13.51□□□□□ -0.25
TPM1-230ENST00000561266 TEDDM1Q5T9Z0 273 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 IRGCQ6NXR0 463 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 LRRC6Q86X45 466 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 PLXDC1Q8IUK5 500 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 PDIK1LQ8N165 341 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 C2CD4AQ8NCU7 369 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms