RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 KRTCAP3Q53RY4 240 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 PPP6R3Q5H9R7 873 aaPredicted RBP9.21□□□□□ -0.94
HERC1-210ENST00000560897 WDR59Q6PJI9 974 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 KIRREL2Q6UWL6 708 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 Q6ZPB1 254 aaPredicted RBP9.21□□□□□ -0.94
HERC1-210ENST00000560897 NCCRP1Q6ZVX7 275 aaPredicted RBP9.21□□□□□ -0.94
HERC1-210ENST00000560897 CAMKMTQ7Z624 323 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 ZNF547Q8IVP9 402 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 DMRTC2Q8IXT2 367 aaPredicted RBP9.21□□□□□ -0.94
HERC1-210ENST00000560897 KBTBD2Q8IY47 623 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 TRAM1L1Q8N609 369 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 AGAP11Q8TF27 550 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 SLC20A1Q8WUM9 679 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 ASB5Q8WWX0 329 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 HAS2Q92819 552 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 C12orf66Q96MD2 445 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 NUP85Q9BW27 656 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 ZNF395Q9H8N7 513 aaPredicted RBP9.21□□□□□ -0.94
HERC1-210ENST00000560897 GDPD2Q9HCC8 539 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 FANCLQ9NW38 375 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 DHCR7Q9UBM7 475 aaKnown RBP9.21□□□□□ -0.94
HERC1-210ENST00000560897 SLC24A2Q9UI40 661 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 CHKBQ9Y259 395 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 TTLL3Q9Y4R7 772 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 COLEC10Q9Y6Z7 277 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 FAM90A27PA6NNH2 459 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 E9PLN8 166 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 PRRG2O14669 202 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 MAP2K7O14733 419 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 CNOT3O75175 753 aaKnown RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 SLC4A1P02730 911 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 CALB1P05937 261 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 FDXRP22570 491 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 NSFP46459 744 aaKnown RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 RPL26P61254 145 aaKnown RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 YBX1P67809 324 aaKnown RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 CACNG1Q06432 222 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 VWA3BQ502W6 1294 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 ISM2Q6H9L7 571 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 DNAJC24Q6P3W2 148 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 TLDC1Q6P9B6 456 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 NOP9Q86U38 636 aaKnown RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 ZNF677Q86XU0 584 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.2□□□□□ -0.94
HERC1-210ENST00000560897 ZNF655Q8N720 491 aaPredicted RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 BEND7Q8N7W2 519 aaPredicted RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 OR4E2Q8NGC2 313 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 GOT1L1Q8NHS2 421 aaPredicted RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 SLC30A5Q8TAD4 765 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 THAP3Q8WTV1 239 aaPredicted RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 FKBP10Q96AY3 582 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 GPR137Q96N19 417 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 LYSMD1Q96S90 227 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 VKORC1Q9BQB6 163 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 TDRD1Q9BXT4 1180 aaKnown RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 ZCCHC2Q9C0B9 1178 aaKnown RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 KLHL25Q9H0H3 589 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 SRMSQ9H3Y6 488 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 GOLPH3LQ9H4A5 285 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 DEF6Q9H4E7 631 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 OCEL1Q9H607 264 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 KIR3DX1Q9H7L2 352 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 SAMSN1Q9NSI8 373 aaKnown RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 ADAM22Q9P0K1 906 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 NXT1Q9UKK6 140 aaKnown RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 RPL26L1Q9UNX3 145 aaKnown RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 ZNF835Q9Y2P0 537 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 LUC7L2Q9Y383 392 aaKnown RBP9.2□□□□□ -0.94
HERC1-210ENST00000560897 HS3ST3B1Q9Y662 390 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 HCFC1P51610 2035 aa9.2□□□□□ -0.94
HERC1-210ENST00000560897 ATRQ13535 2644 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 RNF212BA8MTL3 300 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 IDSB3KWA1 339 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 PROM1O43490 865 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 WFS1O76024 890 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 PRAMEF1O95521 474 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 HPP00738 406 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 ALAS2P22557 587 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 CES1P23141 567 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 PBLDP30039 288 aaPredicted RBP9.19□□□□□ -0.94
HERC1-210ENST00000560897 PRDX3P30048 256 aaKnown RBP9.19□□□□□ -0.94
HERC1-210ENST00000560897 ZNF135P52742 658 aaPredicted RBP9.19□□□□□ -0.94
HERC1-210ENST00000560897 DCDC1P59894 354 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 PMP22Q01453 160 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 ALDH6A1Q02252 535 aaKnown RBP9.19□□□□□ -0.94
HERC1-210ENST00000560897 DCUN1D2Q6PH85 259 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 CDHR3Q6ZTQ4 885 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 CLYBLQ8N0X4 340 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 C3orf20Q8ND61 904 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 WFDC11Q8NEX6 87 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 BRSK1Q8TDC3 778 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 BRIX1Q8TDN6 353 aaKnown RBP9.19□□□□□ -0.94
HERC1-210ENST00000560897 DENND1AQ8TEH3 1009 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 DLG3Q92796 817 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 MCEEQ96PE7 176 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 KCTD15Q96SI1 283 aaPredicted RBP9.19□□□□□ -0.94
HERC1-210ENST00000560897 CNPY3Q9BT09 278 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 VPS16Q9H269 839 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 CLSTN2Q9H4D0 955 aa9.19□□□□□ -0.94
HERC1-210ENST00000560897 SOX17Q9H6I2 414 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms